Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000742.1 | Gene: | CHRND / 1144 | HGNCID: | 1965 | Length: | 517 | Species: | Homo sapiens |
Alignment Length: | 485 | Identity: | 178/485 - (36%) |
---|---|---|---|
Similarity: | 276/485 - (56%) | Gaps: | 38/485 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 KRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDP 95
Fly 96 EEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVEY 160
Fly 161 FPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSN----LVQVGIDLTEFYLSVEWDILEVPATKN 221
Fly 222 EEYYPDTLEPF-----SDITFKLTMRRKTLFYTVNLIVPCVALTFLTVLVFYLPSDSGEKVTLCI 281
Fly 282 SILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLV 346
Fly 347 RKLFLHFMPKLMMMRRTQYTLPDYDDSTP--------SNGYTNEID---VRDSISDFPSEFKDSQ 400
Fly 401 DG---AYDNGMQNSVDSDNVIPRNLTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDR 462
Fly 463 FFLWLFTLSCVFGTLAIICQSPSLYDTRSP 492 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 174/470 (37%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 80/224 (36%) | ||
CHRND | NP_000742.1 | Neur_chan_LBD | 25..246 | CDD:308532 | 79/222 (36%) |
Neur_chan_memb | 253..489 | CDD:308533 | 90/241 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |