Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000734.2 | Gene: | CHRNA3 / 1136 | HGNCID: | 1957 | Length: | 505 | Species: | Homo sapiens |
Alignment Length: | 498 | Identity: | 222/498 - (44%) |
---|---|---|---|
Similarity: | 326/498 - (65%) | Gaps: | 40/498 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LLCVFLLVPLANSTAPISFEANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVN 70
Fly 71 LKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKAT 135
Fly 136 LKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLVQVGI 200
Fly 201 DLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPCVALTFLTVL 265
Fly 266 VFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTTVCVL 330
Fly 331 NIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRRTQYTLPDYDDSTPSNGYTNEIDVRDSISDFPS- 394
Fly 395 ---EFKDSQDGA-------------YDNGMQNSVDSDNVIP----RNLTPEVLQALRAVRFIAQH 439
Fly 440 IKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQ 482 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 219/490 (45%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 100/217 (46%) | ||
CHRNA3 | NP_000734.2 | Neur_chan_LBD | 30..496 | CDD:332142 | 216/484 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 251 | 1.000 | Domainoid score | I2107 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 485 | 1.000 | Inparanoid score | I1448 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3292 |
OMA | 1 | 1.010 | - | - | QHG45250 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8639 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101158 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2381 |
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.860 |