Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_683746.1 | Gene: | Chrnb4 / 108015 | MGIID: | 87892 | Length: | 495 | Species: | Mus musculus |
Alignment Length: | 505 | Identity: | 212/505 - (41%) |
---|---|---|---|
Similarity: | 312/505 - (61%) | Gaps: | 74/505 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 ANPDTKRLYDDLL--SNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFD 88
Fly 89 YKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSS 153
Fly 154 CEMNVEYFPYDEQICFMKFGSWTYNGAQVD--LKHLDQIPGSNLVQVGIDLTEFYLSVEWDILEV 216
Fly 217 PATKNEEYYPDTLEP----FSDITFKLTMRRKTLFYTVNLIVPCVALTFLTVLVFYLPSDSGEKV 277
Fly 278 TLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTTVCVLNIHFRSPSTHNM 342
Fly 343 SPLVRKLFLHFMPKLMMMRR-------------TQYTLPDYD--------DSTPSNGYTNEIDVR 386
Fly 387 DSISDFPSEFKDSQDGAYDNGMQNSVDSDNV-IPRN--------LTPEVLQALRAVRFIAQHIKD 442
Fly 443 ADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQSPSLYDTRSP 492 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 209/490 (43%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 92/225 (41%) | ||
Chrnb4 | NP_683746.1 | LIC | 21..483 | CDD:273305 | 209/495 (42%) |
Neur_chan_LBD | 26..231 | CDD:280998 | 91/223 (41%) | ||
Neur_chan_memb | 238..481 | CDD:280999 | 110/257 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm11113 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |