Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004914998.2 | Gene: | chrna2 / 100495873 | XenbaseID: | XB-GENE-1013893 | Length: | 510 | Species: | Xenopus tropicalis |
Alignment Length: | 514 | Identity: | 231/514 - (44%) |
---|---|---|---|
Similarity: | 317/514 - (61%) | Gaps: | 62/514 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SLLC---VFLLVPLANSTAPISFEANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQL 66
Fly 67 IEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLM 131
Fly 132 TKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLV 196
Fly 197 QVGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPCVALTF 261
Fly 262 LTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTT 326
Fly 327 VCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRR---------TQYTLPDYDDSTPSNGYTNE 382
Fly 383 IDVRDSISDFPSEFK-----------DSQDGAYD-----NGMQNSVDSDNVIPRN---------- 421
Fly 422 -LTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAI 479 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 228/505 (45%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 102/217 (47%) | ||
chrna2 | XP_004914998.2 | LIC | 9..503 | CDD:273305 | 231/514 (45%) |
LGIC_ECD_nAChR_A2 | 32..238 | CDD:349816 | 103/220 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 252 | 1.000 | Domainoid score | I2037 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 477 | 1.000 | Inparanoid score | I1443 |
OMA | 1 | 1.010 | - | - | QHG45250 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm14085 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.980 |