Sequence 1: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937929.1 | Gene: | chrna5 / 100379824 | XenbaseID: | XB-GENE-5755296 | Length: | 476 | Species: | Xenopus tropicalis |
Alignment Length: | 482 | Identity: | 201/482 - (41%) |
---|---|---|---|
Similarity: | 292/482 - (60%) | Gaps: | 66/482 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 WSLLCVFLLVPLANSTAPISFEANPDTKRLYDDLL--SNYNRLIRPVVNNTETLTVWLGLKLSQL 66
Fly 67 IEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLM 131
Fly 132 TKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLV 196
Fly 197 QVGIDLTEFYLSVEWDILEVPATKNEE-----YYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPC 256
Fly 257 VALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSL 321
Fly 322 SVWTTVCVLNIHFRSPSTHN-MSPLVRKLFLHFMPKLMMMRRTQYTLPDYDDSTPSNGYTNEIDV 385
Fly 386 RDSISDFPSEFKDSQDGAYDNGMQNSVDSDNVIPRNLTPEVLQALRAVRFIAQHIKDADKDNEIV 450
Fly 451 EDWKFVSMVLDRFFLWLFTLSCVFGTL 477 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 198/477 (42%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 95/224 (42%) | ||
chrna5 | XP_002937929.1 | LIC | 19..453 | CDD:273305 | 201/482 (42%) |
LGIC_ECD_nAChR_A5 | 47..255 | CDD:349819 | 95/226 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 252 | 1.000 | Domainoid score | I2037 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |