Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476532.2 | Gene: | Chrna6 / 81721 | RGDID: | 69281 | Length: | 493 | Species: | Rattus norvegicus |
Alignment Length: | 503 | Identity: | 209/503 - (41%) |
---|---|---|---|
Similarity: | 303/503 - (60%) | Gaps: | 67/503 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 KRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDP 110
Fly 111 SEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRY 175
Fly 176 FPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKY 240
Fly 241 YPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTM 305
Fly 306 FFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRL 370
Fly 371 PKLLLMRVPKDLLRDLAANKINYGLKFSKT--------KFGQALMDEMQMNSGGSSPDSLRRMQG 427
Fly 428 RVGAGGCNGMHVTTATNRFSGLVGALGGGLSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEK 492
Fly 493 AIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGT 540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 98/216 (45%) |
LIC | 47..544 | CDD:273305 | 209/502 (42%) | ||
Chrna6 | NP_476532.2 | LIC | 34..483 | CDD:273305 | 209/503 (42%) |
LGIC_ECD | 34..240 | CDD:355788 | 98/214 (46%) | ||
Cys-loop | 158..172 | CDD:349787 | 7/13 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 253 | 1.000 | Domainoid score | I1995 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 477 | 1.000 | Inparanoid score | I1422 |
OMA | 1 | 1.010 | - | - | QHG45250 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm12327 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.980 |