Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001035417.1 | Gene: | chrna2a / 678575 | ZFINID: | ZDB-GENE-040108-2 | Length: | 520 | Species: | Danio rerio |
Alignment Length: | 565 | Identity: | 249/565 - (44%) |
---|---|---|---|
Similarity: | 332/565 - (58%) | Gaps: | 105/565 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LLAHIWRHCKPLCLLLVLLLLCETVQ---------ANPDAKRLYDDLLSNYNRLIRPVSNNTDTV 70
Fly 71 LVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
Fly 136 NADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLK 200
Fly 201 HISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYT 265
Fly 266 VNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLF 330
Fly 331 TMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLAANKINYGL 395
Fly 396 KFSKTKFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGG--CNGMHVTTATNRFSGLVGALGGGLS 458
Fly 459 T-LSGYNGLPSVLS-GLDDS-----------LSDVAARKKYPFELE---------------KAIH 495
Fly 496 NVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGT 540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 116/218 (53%) |
LIC | 47..544 | CDD:273305 | 240/524 (46%) | ||
chrna2a | NP_001035417.1 | LIC | 9..513 | CDD:273305 | 249/565 (44%) |
Neur_chan_LBD | 37..243 | CDD:280998 | 116/216 (54%) | ||
Neur_chan_memb | 250..511 | CDD:280999 | 120/303 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I2065 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1461 |
OMA | 1 | 1.010 | - | - | QHG45250 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.880 |