Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
Alignment Length: | 568 | Identity: | 321/568 - (56%) |
---|---|---|---|
Similarity: | 397/568 - (69%) | Gaps: | 67/568 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 ANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHK 105
Fly 106 FKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCE 170
Fly 171 IDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAE 235
Fly 236 RHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISIL 300
Fly 301 LSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSF 365
Fly 366 FIKRLPKLLLMRVPK----------DLLRDLAANKINYGLKFSKTKFGQALMDEMQMNSGGSSPD 420
Fly 421 SLRRMQGRVGAGGCNGMHVTTATNRFSGLVGALGGGLSTLSGYNGLPS--VLSGLDDSL------ 477
Fly 478 -SDVAA------------------RKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMV 523
Fly 524 MDRLFLWLFMIASLVGTFVILGEAPSLYDDTKAIDVQLSDVAKQIYNL 571 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 164/218 (75%) |
LIC | 47..544 | CDD:273305 | 302/533 (57%) | ||
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 161/215 (75%) |
LIC | 27..530 | CDD:273305 | 302/532 (57%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 135/311 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I2065 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1461 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
9 | 8.970 |