Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
Alignment Length: | 543 | Identity: | 122/543 - (22%) |
---|---|---|---|
Similarity: | 219/543 - (40%) | Gaps: | 154/543 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 PLCLLLVLLLLCETVQANPDA--------------KRLYDDLLSNYNRLIRPVSNNTDT-VLVKL 74
Fly 75 GLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADG 139
Fly 140 EYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQ 204
Fly 205 KN--------DKDNKVEIGIDLREYYPSVEWDILGVPAERH---EKYYPCCAEPYPDIFFNITLR 258
Fly 259 RKTLFYTVNLIIPCVGISYLSVLVFYLPAD-SGEKIALCISILLSQTMFFLLISEIIPSTSLALP 322
Fly 323 LLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLA 387
Fly 388 ANKINYGLKFSKTKFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLVGA 452
Fly 453 LGGGLSTLSGYNGLPSVLSGLDDSLSD-VAARKKYPF-ELEKAIHNVMFIQHHMQRQDEFNAEDQ 515
Fly 516 DWGFVAMVMDRLFLWLFMIASLV 538 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 67/244 (27%) |
LIC | 47..544 | CDD:273305 | 116/507 (23%) | ||
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 116/521 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 65/225 (29%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 47/272 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |