Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
Alignment Length: | 316 | Identity: | 63/316 - (19%) |
---|---|---|---|
Similarity: | 146/316 - (46%) | Gaps: | 38/316 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSE 112
Fly 113 YGGVTELYVP---SEHIWLPDIVLYNNADGE-YVVTTMTKAI-LHYTGKVVWTPPAIFKSSCEID 172
Fly 173 VRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEI--GIDLREYYPSVEWDILGVPAE 235
Fly 236 RHEKYYPCCAE-PYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPAD-SGEKIALCIS 298
Fly 299 ILLSQTMFFLLISEIIPSTSLALPLLGKY---LLFTMLLVGLSVVITII-ILNIHY 350 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 42/222 (19%) |
LIC | 47..544 | CDD:273305 | 63/316 (20%) | ||
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 63/316 (20%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 41/220 (19%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 21/88 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |