Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
Alignment Length: | 786 | Identity: | 312/786 - (39%) |
---|---|---|---|
Similarity: | 408/786 - (51%) | Gaps: | 243/786 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 LLLVLLLLCETVQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILT 92
Fly 93 TNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKV 157
Fly 158 VWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYY 222
Fly 223 PSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPA 287
Fly 288 DSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRK 352
Fly 353 PSTHKMRPWIRSFFIKRLPKLLLMRVP-----------KDL---------LRD--------LAAN 389
Fly 390 KINYGLKFSKTKFG---------QALMDEMQMNSGGS---------------------------- 417
Fly 418 ----------------------SPDSLRRM------QGRVGAGGCNG------------------ 436
Fly 437 -----------------MHVTTATNRF----------------------------SGLV------ 450
Fly 451 -------------------------------------------------GALGGGLST------- 459
Fly 460 ----LSGYNGLPSVLSGLDDSL---------------SDVAARKKYPFELEKAIHNVMFIQHHMQ 505
Fly 506 RQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSLYDDTKAIDVQLSDVAKQIYN 570
Fly 571 LTEKKN 576 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 152/218 (70%) |
LIC | 47..544 | CDD:273305 | 289/733 (39%) | ||
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 149/215 (69%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 70/110 (64%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | 27/76 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I2065 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1461 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
9 | 8.970 |