Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510359.3 | Gene: | lgc-25 / 181525 | WormBaseID: | WBGene00010994 | Length: | 502 | Species: | Caenorhabditis elegans |
Alignment Length: | 540 | Identity: | 121/540 - (22%) |
---|---|---|---|
Similarity: | 220/540 - (40%) | Gaps: | 121/540 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LLVLLLLCETVQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQL--IDLNLKDQIL 91
Fly 92 TTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGE--YVVTTMTKAILHYT 154
Fly 155 GKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLK--HISQKNDKDNKVEIGID 217
Fly 218 LREYYPSVE---------WDILGVPAERHEKYYP-CCAEPYPD---------IFFNITLRRKTLF 263
Fly 264 YTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGK-- 326
Fly 327 ---------YLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDL 382
Fly 383 L---RDLAANKI--NYGLKFSKTK-----FGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGM 437
Fly 438 H-------------------VTTATNRFSGLVGALGGGLSTLSGYNGLPSVLSGLDDS-LSDVAA 482
Fly 483 R--KKYPFELEKAIHNVMFI 500 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 60/243 (25%) |
LIC | 47..544 | CDD:273305 | 117/522 (22%) | ||
lgc-25 | NP_510359.3 | LGIC_ECD_cation | 52..256 | CDD:349790 | 52/214 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |