Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498710.2 | Gene: | cup-4 / 176104 | WormBaseID: | WBGene00000845 | Length: | 433 | Species: | Caenorhabditis elegans |
Alignment Length: | 393 | Identity: | 70/393 - (17%) |
---|---|---|---|
Similarity: | 142/393 - (36%) | Gaps: | 94/393 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 LCLLLVLLLLCETVQANP----------DAKRLYD------------DLLSNYNRLIRPVSNNTD 68
Fly 69 TVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
Fly 134 YNNADG---EYVVTTMTKAILHYTG----KVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWT 191
Fly 192 YDGDQIDLKHI------------SQKNDK---DNKVE--------------------IGIDLREY 221
Fly 222 YPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLP 286
Fly 287 ADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVI-TIIILNIHY 350
Fly 351 RKP 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 49/272 (18%) |
LIC | 47..544 | CDD:273305 | 64/362 (18%) | ||
cup-4 | NP_498710.2 | Neur_chan_LBD | 48..>222 | CDD:280998 | 36/175 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |