Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492399.1 | Gene: | unc-29 / 172703 | WormBaseID: | WBGene00006765 | Length: | 493 | Species: | Caenorhabditis elegans |
Alignment Length: | 556 | Identity: | 201/556 - (36%) |
---|---|---|---|
Similarity: | 316/556 - (56%) | Gaps: | 96/556 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LLVLLLLCETVQANPDAKRLYDDLLSNYNRLIRPVSNNTD-TVLVKLGLRLSQLIDLNLKDQILT 92
Fly 93 TNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKV 157
Fly 158 VWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYY 222
Fly 223 PSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPA 287
Fly 288 DSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRK 352
Fly 353 PSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLAANKINYGLKFSKTKFGQALMDEMQMNSGGS 417
Fly 418 SPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLVGALGGGLSTLSGYNGLPS----VLSGLDD--- 475
Fly 476 SLSDVAARKK---YPFELE--KAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIA 535
Fly 536 SLVGTFVILGEAPSLYDDTKAIDVQ-LSDVAKQIYN 570 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 92/219 (42%) |
LIC | 47..544 | CDD:273305 | 187/509 (37%) | ||
unc-29 | NP_492399.1 | LIC | 6..466 | CDD:273305 | 193/530 (36%) |
Neur_chan_LBD | 30..230 | CDD:280998 | 89/216 (41%) | ||
Neur_chan_memb | 237..462 | CDD:280999 | 91/286 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |