Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491472.1 | Gene: | unc-38 / 172105 | WormBaseID: | WBGene00006774 | Length: | 511 | Species: | Caenorhabditis elegans |
Alignment Length: | 551 | Identity: | 257/551 - (46%) |
---|---|---|---|
Similarity: | 343/551 - (62%) | Gaps: | 76/551 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 LLLVLLLLC----ETVQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKD 88
Fly 89 QILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHY 153
Fly 154 TGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDL----------KHISQKNDK 208
Fly 209 DN--KVEIGIDLREYYPSVEWDILGVPAERHEKYYP-CCAE-PYPDIFFNITLRRKTLFYTVNLI 269
Fly 270 IPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLL 334
Fly 335 VGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLAANKINYGLKFSK 399
Fly 400 TKFGQALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLVGALGGGLSTLSGYN 464
Fly 465 GLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFL 529
Fly 530 WLFMIASLVGTFVILGEAPSLYDDTKAIDVQ 560 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 125/232 (54%) |
LIC | 47..544 | CDD:273305 | 237/510 (46%) | ||
unc-38 | NP_491472.1 | Neur_chan_LBD | 27..257 | CDD:280998 | 123/229 (54%) |
LIC | 29..483 | CDD:273305 | 238/511 (47%) | ||
Neur_chan_memb | 264..481 | CDD:280999 | 109/274 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 524 | 1.000 | Inparanoid score | I677 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45250 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.940 |