Sequence 1: | NP_524482.1 | Gene: | nAChRalpha2 / 42919 | FlyBaseID: | FBgn0000039 | Length: | 576 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001241879.1 | Gene: | chrng / 100536659 | ZFINID: | ZDB-GENE-030131-3805 | Length: | 540 | Species: | Danio rerio |
Alignment Length: | 553 | Identity: | 178/553 - (32%) |
---|---|---|---|
Similarity: | 285/553 - (51%) | Gaps: | 65/553 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 IWRHCKPLCLLLVLLLLCETVQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLID 83
Fly 84 LNLKDQILTTNVWLEHEWQDHKFKWDP----SEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVT 144
Fly 145 TMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKD 209
Fly 210 NKVE--IGIDLREYYPSVEWDILGVPAER--HEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLII 270
Fly 271 PCVGISYLSVLVFYLPADS-GEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLL 334
Fly 335 VGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRV----PKDLLRDLAANKINYGL 395
Fly 396 KFSKTKFGQ----ALMDEMQMNSGGSSPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLVGALGGG 456
Fly 457 LSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVA 521
Fly 522 MVMDRLFLWLFMIASLVGTFVI-----LGEAPS 549 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha2 | NP_524482.1 | LGIC_ECD_nAChR_proto_alpha-like | 44..263 | CDD:349832 | 87/226 (38%) |
LIC | 47..544 | CDD:273305 | 169/518 (33%) | ||
chrng | NP_001241879.1 | LIC | 21..511 | CDD:273305 | 170/524 (32%) |
Neur_chan_LBD | 27..246 | CDD:280998 | 86/224 (38%) | ||
Neur_chan_memb | 253..509 | CDD:280999 | 77/284 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |