Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001041528.1 | Gene: | chrna4b / 556619 | ZFINID: | ZDB-GENE-090505-3 | Length: | 627 | Species: | Danio rerio |
Alignment Length: | 624 | Identity: | 245/624 - (39%) |
---|---|---|---|
Similarity: | 334/624 - (53%) | Gaps: | 153/624 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 KRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNP 90
Fly 91 DDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 155
Fly 156 FPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFY 220
Fly 221 SCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVF 285
Fly 286 FLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILP 350
Fly 351 KLLCIERP------------------------------------------------KKEEPEEDQ 367
Fly 368 --------------------------------------------------PPEVLTDVYH-LPPD 381
Fly 382 VDKFVNYDSKRFSGDYGIPALPAS------------------HRFDLAAAGGISAHCFAEPPLPS 428
Fly 429 SLPLPGADDDLFSPSGLNGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKN 493
Fly 494 KDKFESVEEDWKYVAMVLDRMFLWIFAIACVVGTALIIL 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 115/213 (54%) |
LIC | 27..530 | CDD:273305 | 244/619 (39%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 124/399 (31%) | ||
chrna4b | NP_001041528.1 | Neur_chan_LBD | 31..237 | CDD:280998 | 115/213 (54%) |
Neur_chan_memb | 244..618 | CDD:280999 | 124/400 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I2065 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1461 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101158 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.770 |