Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996947.1 | Gene: | chrnd / 404273 | ZFINID: | ZDB-GENE-030131-6665 | Length: | 518 | Species: | Danio rerio |
Alignment Length: | 563 | Identity: | 191/563 - (33%) |
---|---|---|---|
Similarity: | 294/563 - (52%) | Gaps: | 77/563 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGSVLFAAVFIALHFATGGLANPDAKRLYDDLLS--NYNRLIRPVGNNSDRLTVKMGLRLSQLID 63
Fly 64 VNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTK 128
Fly 129 AILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSD---N 190
Fly 191 IE-VGIDLQDYYISVEWDIMRVPAVRNEKFYSCC---EEPYLDIVFNLTLRRKTLFYTVNLIIPC 251
Fly 252 VGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTL 316
Fly 317 SVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILPKLLCIERPKKEEPEEDQP-PEVLTDVYHLPP 380
Fly 381 DVDKFVNYDSKRFSGDYGIPALPASH-----RFDLAAAGGISAHCFAEPPLPSSLPLPGADDDLF 440
Fly 441 SPSGLNGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESVEEDWK 505
Fly 506 YVAMVLDRMFLWIFAIACVVGTALIIL-----QAPSLYDQSQP 543 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 78/223 (35%) |
LIC | 27..530 | CDD:273305 | 178/517 (34%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 94/288 (33%) | ||
chrnd | NP_996947.1 | LIC | 6..493 | CDD:273305 | 184/543 (34%) |
Neur_chan_LBD | 25..245 | CDD:280998 | 78/223 (35%) | ||
Neur_chan_memb | 252..490 | CDD:280999 | 94/289 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |