Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261986.1 | Gene: | SecCl / 39949 | FlyBaseID: | FBgn0036727 | Length: | 509 | Species: | Drosophila melanogaster |
Alignment Length: | 314 | Identity: | 78/314 - (24%) |
---|---|---|---|
Similarity: | 129/314 - (41%) | Gaps: | 43/314 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 YNRLIRPVGNNSD--RLTVKMGLRLSQLIDVNLKNQIM--TTNVWVEQEWNDYKLKW----NPDD 92
Fly 93 YGGVDTLHVPSEHIWLPDIVLYNNAD----GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDV 153
Fly 154 EYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEW----------DI 208
Fly 209 MRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSD-SGEKI 272
Fly 273 SLCISILLSLTVFFLLLAEIIPPTSL----TVPLLGKYLLFTMMLVTLSVVVTI 322 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 54/225 (24%) |
LIC | 27..530 | CDD:273305 | 78/314 (25%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 22/81 (27%) | ||
SecCl | NP_001261986.1 | LIC | 43..505 | CDD:273305 | 78/314 (25%) |
Neur_chan_LBD | 44..267 | CDD:280998 | 54/225 (24%) | ||
Neur_chan_memb | 275..503 | CDD:280999 | 22/80 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447286 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |