Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001356885.1 | Gene: | nAChRalpha5 / 34826 | FlyBaseID: | FBgn0028875 | Length: | 837 | Species: | Drosophila melanogaster |
Alignment Length: | 590 | Identity: | 219/590 - (37%) |
---|---|---|---|
Similarity: | 319/590 - (54%) | Gaps: | 79/590 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SVLFAAVFIALHFATGGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLK 67
Fly 68 NQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 132
Fly 133 HTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDL 197
Fly 198 QDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVF 262
Fly 263 YLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNV 327
Fly 328 NFRSPVTHRMAPWVQRLFIQILPKLLCIERPKK-----------EEPEEDQPPEVLTDVYHLPP- 380
Fly 381 ----------DVDKFVNYDSKRFSGDYGIPALPASHRFDLAAAGGISAHCFAEPPLPSSLPLPGA 435
Fly 436 DDDLFSPSGLNGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESV 500
Fly 501 EEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYDQSQP-------------IDILYSKIA 552
Fly 553 KKKFE 557 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 105/214 (49%) |
LIC | 27..530 | CDD:273305 | 202/524 (39%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 94/304 (31%) | ||
nAChRalpha5 | NP_001356885.1 | LIC | 313..802 | CDD:273305 | 204/530 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447316 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |