Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162795.1 | Gene: | nAChRalpha7 / 32928 | FlyBaseID: | FBgn0086778 | Length: | 564 | Species: | Drosophila melanogaster |
Alignment Length: | 541 | Identity: | 208/541 - (38%) |
---|---|---|---|
Similarity: | 302/541 - (55%) | Gaps: | 68/541 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 ANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYK 85
Fly 86 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCE 150
Fly 151 IDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVR 215
Fly 216 NEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILL 280
Fly 281 SLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLF 345
Fly 346 IQILPKLLCIERP---------------------KKE-----EPEEDQPPEVLTDVYHLPPDVDK 384
Fly 385 FVNYDSKRFSGDYGIPALPASHRFDLAAAGGISAHCFAEPPLPSSLPLPGADDDLFSPSGLNGDI 449
Fly 450 SPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRM 514
Fly 515 FLWIFAIACVVGTALIILQAP 535 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 101/214 (47%) |
LIC | 27..530 | CDD:273305 | 203/528 (38%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 98/308 (32%) | ||
nAChRalpha7 | NP_001162795.1 | LIC | 59..548 | CDD:273305 | 204/530 (38%) |
Neur_chan_LBD | 61..268 | CDD:280998 | 101/214 (47%) | ||
Neur_chan_memb | 275..552 | CDD:280999 | 98/310 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447318 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |