| Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
| Alignment Length: | 773 | Identity: | 337/773 - (43%) |
|---|---|---|---|
| Similarity: | 418/773 - (54%) | Gaps: | 229/773 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 9 VFIALHFATGGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTT 73
Fly 74 NVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVV 138
Fly 139 WKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYIS 203
Fly 204 VEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDS 268
Fly 269 GEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPV 333
Fly 334 THRMAPWVQRLFIQILPKLLCIERPKKEEPE------------------EDQ-----PPEVLTDV 375
Fly 376 YHLPPDVDKFVNYDSKRFSGDYGI----------------------------------------- 399
Fly 400 ------------------PALPASHRFDLAAA--------------GGISAH------------- 419
Fly 420 -CFAE-PPLP-----SSLPLPGADDDLFSPSGLN-----------GDISPGCC------------ 454
Fly 455 ------------------------------------------------------------PAAAA 459
Fly 460 AAAA-------------DLSPTFEK---PY--------------AREMEKTIEGSRFIAQHVKNK 494
Fly 495 DKFESVEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYDQSQPIDILYSKIA 552 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 159/214 (74%) |
| LIC | 27..530 | CDD:273305 | 313/731 (43%) | ||
| Neur_chan_memb | 247..530 | CDD:280999 | 148/511 (29%) | ||
| nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 159/214 (74%) |
| Neur_chan_memb | 248..>359 | CDD:280999 | 81/110 (74%) | ||
| Neur_chan_memb | <683..760 | CDD:280999 | 31/76 (41%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45447336 | |
| Domainoid | 1 | 1.000 | 250 | 1.000 | Domainoid score | I2065 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I1461 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4201 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
| OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101158 | |
| Panther | 1 | 1.100 | - | - | P | PTHR18945 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X294 | |
| 12 | 11.750 | |||||