Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023961.1 | Gene: | acr-17 / 191603 | WormBaseID: | WBGene00000056 | Length: | 515 | Species: | Caenorhabditis elegans |
Alignment Length: | 576 | Identity: | 158/576 - (27%) |
---|---|---|---|
Similarity: | 268/576 - (46%) | Gaps: | 104/576 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 IALHFATGGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLT-VKMGLRLSQLIDVNLKNQIMTTN 74
Fly 75 VWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNY-EVTIMTKAILHHTGKVV 138
Fly 139 WKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTAD-------SDNIEVGID 196
Fly 197 LQDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLV 261
Fly 262 FYLP-SDSG---EKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKY---LLFTMMLVTLSVV 319
Fly 320 VTIAV-LNVNFRSPVTHRMAPWVQRLFIQILPKLLCIERPK---------KEEPEEDQPPEVLTD 374
Fly 375 VYHLPPDVDK-----FVNYDSKRFSGDYGIPALPASHRFDLAAAGGISAHCFAEPPLPSSLPLPG 434
Fly 435 ADDDLFSPSGLNGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFES 499
Fly 500 VEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYDQSQPIDILYSKIAKKK 555 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 78/223 (35%) |
LIC | 27..530 | CDD:273305 | 145/533 (27%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 67/304 (22%) | ||
acr-17 | NP_001023961.1 | LIC | 23..491 | CDD:273305 | 146/532 (27%) |
Neur_chan_LBD | 24..245 | CDD:280998 | 78/223 (35%) | ||
Neur_chan_memb | 252..491 | CDD:280999 | 67/300 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |