Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_495716.1 | Gene: | acr-14 / 191601 | WormBaseID: | WBGene00000053 | Length: | 500 | Species: | Caenorhabditis elegans |
Alignment Length: | 571 | Identity: | 165/571 - (28%) |
---|---|---|---|
Similarity: | 271/571 - (47%) | Gaps: | 132/571 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 FIALHFATGGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTN 74
Fly 75 VWVEQEWNDYKLKWNPDDYGGVDTLHVPSE-----HIWLPDIVLYNNADGNYEVTIMTKAILHHT 134
Fly 135 GKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHL--------------KQT 185
Fly 186 ADSDN-----IEVGIDLQDYYISVEWDIMRVPAVR-NEKFYSCCEEPYLDIVFNLTLRRKTLFYT 244
Fly 245 VNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLF 309
Fly 310 TMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILPKLLCIERPKKEEPEEDQP----PE 370
Fly 371 VL------------TDVYHLP-------PDVDKFVNYDSKRFSGDYGIPALPASHRFDLAAAGGI 416
Fly 417 SAHCFAEPPLPSSLPLPGADDDLFSPSGLNGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTI 481
Fly 482 EGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRMFLWIF-AIACVVGTALII 531 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 82/239 (34%) |
LIC | 27..530 | CDD:273305 | 158/551 (29%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 72/306 (24%) | ||
acr-14 | NP_495716.1 | LIC | 21..483 | CDD:273305 | 157/544 (29%) |
Neur_chan_LBD | 21..258 | CDD:280998 | 82/239 (34%) | ||
Neur_chan_memb | 265..491 | CDD:280999 | 72/305 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |