Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491906.1 | Gene: | acr-11 / 191599 | WormBaseID: | WBGene00000050 | Length: | 461 | Species: | Caenorhabditis elegans |
Alignment Length: | 536 | Identity: | 185/536 - (34%) |
---|---|---|---|
Similarity: | 278/536 - (51%) | Gaps: | 88/536 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LFAAVFIALHFATGGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 69
Fly 70 IMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVP--SEHIWLPDIVLYNNADGNYEVTIMTKAILH 132
Fly 133 HTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDL 197
Fly 198 QDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVF 262
Fly 263 YLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNV 327
Fly 328 NFRSPVTHRMAPWVQRLFIQILPKLLCIERPKKEEPEEDQPPEVLTDVYHLPPDVDKFVNYDSKR 392
Fly 393 FSGDYGIPALPASHRFDLAAAGGISAHCFAEPPLPSSLPLPGADDDLFSPSGLNGDISPGCCPAA 457
Fly 458 AAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKF-ESVEEDWKYVAMVLDRMFLWIFAI 521
Fly 522 ACVVGTALIILQAPSL 537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 95/216 (44%) |
LIC | 27..530 | CDD:273305 | 178/505 (35%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 79/283 (28%) | ||
acr-11 | NP_491906.1 | LIC | 25..456 | CDD:273305 | 180/515 (35%) |
Neur_chan_LBD | 26..239 | CDD:280998 | 95/219 (43%) | ||
Neur_chan_memb | 246..447 | CDD:280999 | 78/278 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |