Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491354.2 | Gene: | acr-6 / 191479 | WormBaseID: | WBGene00000045 | Length: | 551 | Species: | Caenorhabditis elegans |
Alignment Length: | 562 | Identity: | 211/562 - (37%) |
---|---|---|---|
Similarity: | 317/562 - (56%) | Gaps: | 74/562 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 KRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNP 90
Fly 91 DDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 155
Fly 156 FPFDEQTCFMKFGSWTYDGYMVDLRHL-------KQTADSDN---IEVGIDLQDYYISVEWDIMR 210
Fly 211 VPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLC 275
Fly 276 ISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPW 340
Fly 341 VQRLFIQILPKLLCIERPKKEEPEEDQPPEVLTDVYHLPPDVDKFVNYDS------KRFSGDYGI 399
Fly 400 PALPASHRFDLAAAGGISAHCFAEPPL-----------PS----------SLPLPGADDDLFSPS 443
Fly 444 GLNG----DISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESVEEDW 504
Fly 505 KYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYDQSQPIDI 546 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 95/223 (43%) |
LIC | 27..530 | CDD:273305 | 202/543 (37%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 101/313 (32%) | ||
acr-6 | NP_491354.2 | Neur_chan_LBD | 23..244 | CDD:280998 | 93/220 (42%) |
Neur_chan_memb | 252..524 | CDD:280999 | 99/304 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |