Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_509128.1 | Gene: | acr-2 / 180936 | WormBaseID: | WBGene00000042 | Length: | 575 | Species: | Caenorhabditis elegans |
Alignment Length: | 552 | Identity: | 219/552 - (39%) |
---|---|---|---|
Similarity: | 312/552 - (56%) | Gaps: | 81/552 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 GGLANPDAKRLYDDLLSNYNRLIRPVGN-NSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEW 81
Fly 82 NDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYK 146
Fly 147 SFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRV 211
Fly 212 PAVRNEKFYSCCEEPYL---DIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKIS 273
Fly 274 LCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMA 338
Fly 339 PWVQRLFIQILPKLLCIERPKKEEPEEDQPPEVLTDVYHLPPDVDKFVN--YDSKRFSGDYGIPA 401
Fly 402 LPASH------RFDLAAAGGISAHCFAEPPLPSS--------------LPLPGADDD----LFSP 442
Fly 443 SGLNGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESVEEDWKYV 507
Fly 508 AMVLDRMFLWIFAIACVVGTALIILQAPSLYD 539 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 102/218 (47%) |
LIC | 27..530 | CDD:273305 | 212/532 (40%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 103/308 (33%) | ||
acr-2 | NP_509128.1 | LIC | 54..544 | CDD:273305 | 213/540 (39%) |
Neur_chan_LBD | 60..265 | CDD:280998 | 102/218 (47%) | ||
Neur_chan_memb | 272..544 | CDD:280999 | 103/308 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |