Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000740.1 | Gene: | CHRNB3 / 1142 | HGNCID: | 1963 | Length: | 458 | Species: | Homo sapiens |
Alignment Length: | 548 | Identity: | 230/548 - (41%) |
---|---|---|---|
Similarity: | 308/548 - (56%) | Gaps: | 114/548 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 FAAVFIALHF---ATGGL----ANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLID 63
Fly 64 VNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTK 128
Fly 129 AILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEV 193
Fly 194 GIDLQDYYISVEWDIMRVPAV---RNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGIS 255
Fly 256 FLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVV 320
Fly 321 TIAVLNVNFRSPVT-HRMAPWVQRLFIQILPKLLC----IERPKKEEPEEDQPPEVLTDVYHLPP 380
Fly 381 DVDKFVNYDSKRFSGDYGIPALPASHRFDLAAAGGISAHCFAEPPLPSSLPLPGADDDLFSPSGL 445
Fly 446 NGDISPGCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMV 510
Fly 511 LDRMFLWIFAIACVVGTALIILQAPSLY 538 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 105/217 (48%) |
LIC | 27..530 | CDD:273305 | 217/510 (43%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 109/287 (38%) | ||
CHRNB3 | NP_000740.1 | Neur_chan_LBD | 23..449 | CDD:332142 | 222/524 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 251 | 1.000 | Domainoid score | I2107 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45250 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.830 |