Sequence 1: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000735.1 | Gene: | CHRNA4 / 1137 | HGNCID: | 1958 | Length: | 627 | Species: | Homo sapiens |
Alignment Length: | 601 | Identity: | 255/601 - (42%) |
---|---|---|---|
Similarity: | 338/601 - (56%) | Gaps: | 113/601 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 KRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNP 90
Fly 91 DDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 155
Fly 156 FPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFY 220
Fly 221 SCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVF 285
Fly 286 FLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILP 350
Fly 351 KLLCIERPK--KE--------------------EPEEDQPPEVLTDVYH---------------- 377
Fly 378 ----------LPP----DVDKFVNYDS-------------------------------------- 390
Fly 391 -KRFSGDYGIPALPASHRFDLAAAGGISA---HCFAEPPLPSSLPLPGADDDLFSPSGLNGDISP 451
Fly 452 GCCPAAAAAAAADLSPTFEKPYAREMEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRMFL 516
Fly 517 WIFAIACVVGTALIIL 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 113/213 (53%) |
LIC | 27..530 | CDD:273305 | 254/596 (43%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 136/376 (36%) | ||
CHRNA4 | NP_000735.1 | Neur_chan_LBD | 37..243 | CDD:280998 | 113/213 (53%) |
Neur_chan_memb | 250..618 | CDD:280999 | 136/377 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..481 | 11/98 (11%) | |||
Ten_N | <423..>572 | CDD:284015 | 28/158 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 496..561 | 18/74 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 251 | 1.000 | Domainoid score | I2107 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 485 | 1.000 | Inparanoid score | I1448 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8639 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101158 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.770 |