Protein Alignment nAChRalpha1 and si:ch211-256e16.4

DIOPT Version :9

• Sequence 1: NP_001262916.1
• Gene: nAChRalpha1 / 42918
• FlyBaseID: FBgn0000036
• Length: 597
• Species: Drosophila melanogaster
• Sequence 2: XP_017210328.1
• Gene: si:ch211-256e16.4 / 100333796
• ZFINID: ZDB-GENE-131121-267
• Length: 179
• Species: Danio rerio
• Alignment Length: 104
• Identity: 31/104 - (29%)
• Similarity: 64/104 - (61%)
• Gaps: 4/104 - (3%)

  Fly   227 YLD-IVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLA 290
            |.| :::.:|::|:.|.:.:|:|:|......|.|..:::.:|..:|:|..:::||:::|..|:|.
Zfish     4 YADQLIYQITIKRRPLLHVINIILPVFFFLVLDVTSYFIDTDGADKLSFKVTLLLAISVLLLILN 68

  Fly   291 EIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNF 329
            :.:|.|:..:||:|.|......|:.:|::.||.   |||
Zfish    69 DTLPSTTYELPLIGIYCSAIFSLIGISILETIL---VNF 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nAChRalpha1	NP_001262916.1	Neur_chan_LBD	25..240	CDD:280998	4/13 (31%)
		LIC	27..530	CDD:273305	31/104 (30%)
		Neur_chan_memb	247..530	CDD:280999	25/83 (30%)
si:ch211-256e16.4	XP_017210328.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910