DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13616 and CG5768

DIOPT Version :10

Sequence 1:NP_651262.1 Gene:CG13616 / 42917 FlyBaseID:FBgn0039200 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001369031.1 Gene:CG5768 / 42915 FlyBaseID:FBgn0039198 Length:397 Species:Drosophila melanogaster


Alignment Length:183 Identity:88/183 - (48%)
Similarity:119/183 - (65%) Gaps:12/183 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KVLRRHKRYLAFPEGSSVSGAVCMTIGMIGNPDVDYLSWAVNWGVAYDLPNHQWVIQHAHGLNAT 104
            :.|.|.||||:||||||.|.|||.|:|:||||...|.|:.:||||||||||..||:||.||. ||
  Fly   213 RALSRPKRYLSFPEGSSFSVAVCFTVGIIGNPYYGYNSFGLNWGVAYDLPNTTWVLQHLHGF-AT 276

  Fly   105 --LAKDTIKRRSRRAFYDEVQSLFDNMGFNGRSCVARALCESAKFMLPSVERGNMLQELVRTVFS 167
              :|...::||||.|.|.:::::.||||:|||.|:.|.||||.::...:  :.:|:.|::||:||
  Fly   277 HPVAPAVLRRRSRSAIYRQIEAVVDNMGYNGRDCILRTLCESRQYFQRT--KMSMVGEMLRTIFS 339

  Fly   168 LPPSPV---AAHEPQAHHQYDRIYRRSKRSSRDCHEIYPGCQFSLLALALGKY 217
            ||...:   ..||......||:.||.:  .:.||.:.  .|.||||.||.|||
  Fly   340 LPKQRIFTRELHENADIVHYDQAYRNA--HTDDCTQY--NCHFSLLELAFGKY 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13616NP_651262.1 DM4_12 110..212 CDD:214785 40/104 (38%)
CG5768NP_001369031.1 DM4_12 286..383 CDD:214785 40/102 (39%)

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