DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13616 and CG42811

DIOPT Version :10

Sequence 1:NP_651262.1 Gene:CG13616 / 42917 FlyBaseID:FBgn0039200 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001189279.1 Gene:CG42811 / 10178941 FlyBaseID:FBgn0261993 Length:213 Species:Drosophila melanogaster


Alignment Length:239 Identity:55/239 - (23%)
Similarity:92/239 - (38%) Gaps:69/239 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TG-HF--SLLALCLLLHEVQSQVMSMSSAANRTGEVTKVLRRHKRYLAFPEGSSVSGAVCMTIGM 67
            || ||  :||:|..:|..:.:::.                      |.||..|.......:::.:
  Fly     4 TGVHFMGALLSLWSILRPILAELP----------------------LLFPASSVYQITSSLSVPV 46

  Fly    68 IGNPDVDYLSWAVNWGVA--YDLPNHQWVIQHAHGLNATLAKDTIKRRSRR-------------- 116
            : .|| ..|.|  :||:.  |.||     .:.:....||:..|...||.:|              
  Fly    47 V-IPD-RKLFW--DWGLQMNYALP-----AEPSSFYAATIWPDEFSRRRKRQLWNETAKYLPEGV 102

  Fly   117 -----------AFYDEVQSLFDNMGFNGRSCVARALCESAKFMLPSVERGNMLQELVRTVFSLPP 170
                       ..|:.::::....||: .||:.|::||.|:.....|| .|||..|:  .|:|.|
  Fly   103 STMHPSDFTAGELYESLENMLIQYGFD-ESCLLRSVCELARHPFKDVE-NNMLTALL--TFTLTP 163

  Fly   171 SPVAAHEPQAHHQYDRIYRRSKRS---SRDCHEIYPGCQFSLLA 211
            |...|..| ..:.|..:|..:::.   ..||..:|..|....|:
  Fly   164 SLHEAFAP-GENVYREVYEHAEQQGFLGMDCGHLYSNCPVDFLS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13616NP_651262.1 DM4_12 110..212 CDD:214785 31/130 (24%)
CG42811NP_001189279.1 DM4_12 107..206 CDD:214785 27/103 (26%)

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