DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17780 and CG34428

DIOPT Version :9

Sequence 1:NP_732995.1 Gene:CG17780 / 42914 FlyBaseID:FBgn0039197 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001097597.2 Gene:CG34428 / 5740867 FlyBaseID:FBgn0085457 Length:247 Species:Drosophila melanogaster


Alignment Length:78 Identity:27/78 - (34%)
Similarity:34/78 - (43%) Gaps:12/78 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 NTPVLVKRENR---PFRRDTYELLHELIDRSGLDGRACVLKAYCTALAG--DHGQGFLFKLLKYV 304
            ||..|:.|.|:   .:|...|:.|..|.||.|..||.||||:.|.|...  .:..|....||..:
  Fly   125 NTRKLLTRTNKVLSSYRWTVYKGLEGLADRLGYQGRICVLKSICEAAEEPFHYTNGLFADLLHIL 189

  Fly   305 FT-------LDEH 310
            .|       |.||
  Fly   190 LTPSSSVDKLSEH 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17780NP_732995.1 DM4_12 136..>188 CDD:285126
DM4_12 253..338 CDD:214785 23/70 (33%)
CG34428NP_001097597.2 DM4_12 139..234 CDD:214785 22/64 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21398
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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