DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17780 and CG42812

DIOPT Version :10

Sequence 1:NP_732995.1 Gene:CG17780 / 42914 FlyBaseID:FBgn0039197 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster


Alignment Length:219 Identity:44/219 - (20%)
Similarity:71/219 - (32%) Gaps:101/219 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 WTINTLYAYGY------------GFRANY----PFPSIEEQKKDNAVFFRLFKRD---------- 138
            |.....|.|.|            || |||    ..|.:|...::   |:..:..|          
  Fly    53 WCFAISYNYPYNLTEFYSIPIWPGF-ANYKAKREVPQLEMTDEN---FYTKYGHDNGNGMHPKDF 113

  Fly   139 ----LFSKLETALDGHGFDGRACMLKSFCTAINDVDNPKQKSGMLFKMLKLIFRRAKRYL--DII 197
                |::.||..|.|:||. ..|:|:|.|                 ::.:..|..:.::|  ||:
  Fly   114 SAGELYAFLEDTLTGYGFH-ETCLLRSVC-----------------ELAQHPFDDSHQHLLSDIV 160

  Fly   198 ETTRIFVGIFQVIVNTYINSPLKFRVNAKNNVIKSPIVWAHGYGFRANTPVLVKRENRPFRRDTY 262
                           |::.||.:..                  |||.:             .|.|
  Fly   161 ---------------TFVLSPSQHE------------------GFRDD-------------EDVY 179

  Fly   263 ELLHELIDRSGLDGRACV-LKAYC 285
            ...:||.::.|..||.|: |.::|
  Fly   180 RKAYELAEQDGFLGRDCLRLYSHC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17780NP_732995.1 DM4_12 136..>188 CDD:462285 12/65 (18%)
DM4_12 253..338 CDD:214785 10/34 (29%)
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 31/158 (20%)

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