DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17780 and CG42811

DIOPT Version :9

Sequence 1:NP_732995.1 Gene:CG17780 / 42914 FlyBaseID:FBgn0039197 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001189279.1 Gene:CG42811 / 10178941 FlyBaseID:FBgn0261993 Length:213 Species:Drosophila melanogaster


Alignment Length:99 Identity:24/99 - (24%)
Similarity:35/99 - (35%) Gaps:38/99 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 YGYGFRANYPFPSIEEQKKDNAV------FFRLFKR-------------------------DLFS 141
            :.:|.:.||..|:  |.....|.      |.|..||                         :|:.
  Fly    55 WDWGLQMNYALPA--EPSSFYAATIWPDEFSRRRKRQLWNETAKYLPEGVSTMHPSDFTAGELYE 117

  Fly   142 KLETALDGHGFDGRACMLKSFCT----AINDVDN 171
            .||..|..:||| .:|:|:|.|.    ...||:|
  Fly   118 SLENMLIQYGFD-ESCLLRSVCELARHPFKDVEN 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17780NP_732995.1 DM4_12 136..>188 CDD:285126 16/65 (25%)
DM4_12 253..338 CDD:214785
CG42811NP_001189279.1 DM4_12 107..206 CDD:214785 14/45 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21398
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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