DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18528 and MSS1

DIOPT Version :9

Sequence 1:NP_651251.3 Gene:CG18528 / 42906 FlyBaseID:FBgn0039189 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_013736.1 Gene:MSS1 / 855037 SGDID:S000004625 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:523 Identity:179/523 - (34%)
Similarity:282/523 - (53%) Gaps:45/523 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLRNASQSFLGSFRRFASSGCTIYSLSS-GHVKCGVSVIRVSGPQTKKALRAIVANKEYEPKARQ 66
            |:|.:.:.:.|..:.:.....|||:||: .:....:::||:||...|.....:| :....|..|:
Yeast    17 LVRRSLKRYSGLAKPYTFQQPTIYALSTPANQTSAIAIIRISGTHAKYIYNRLV-DSSTVPPIRK 80

  Fly    67 AYLKSFYHPA-----------SKEMIDRGLLLWFPGPASFTGEDSCEFQVHGSLAVIAAMLDALG 120
            |.|::.|.|:           ||.::|..|||:|..|.||||||..|..|||..||:.::|.|:|
Yeast    81 AILRNIYSPSSCSVKPHDQKESKILLDTSLLLYFQAPYSFTGEDVLELHVHGGKAVVNSILKAIG 145

  Fly   121 KV------DGLRPAEPGEFTKRAFFGGKLDLTEVEGLADLIHAETEAQRKQALLQSTGALARLYD 179
            .:      ..:|.|.||:|::|||..||.|||::||:.|||.:|||:||:.||....|....|::
Yeast   146 SLHDRSSGKDIRFALPGDFSRRAFQNGKFDLTQLEGIKDLIDSETESQRRSALSSFNGDNKILFE 210

  Fly   180 NWRRRLIRCAAHLEAYIDFAEEEQIE----GGIILQLGKELKAVKREIREHLSDQRQGELLRDGV 240
            |||..:|...|.|.|.||||::...|    ..|...:.|.:..::.:|...:....:..:|::|:
Yeast   211 NWRETIIENMAQLTAIIDFADDNSQEIQNTDEIFHNVEKNIICLRDQIVTFMQKVEKSTILQNGI 275

  Fly   241 RTVIIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHNFGGYPVVFSDTAGLRRYTTDSI 305
            :.|::||||||||||:|.|....:|||:|..|||||.|:.|.|..||.|:..||||:|..::|.|
Yeast   276 KLVLLGAPNVGKSSLVNSLTNDDISIVSDIPGTTRDSIDAMINVNGYKVIICDTAGIREKSSDKI 340

  Fly   306 EQEGMQRAKNCLVQSDLILLLAEAKNIAQLTHDDAVAPFVDSYLGELDIPLDMCSGKRLQLVANK 370
            |..|:.|||...|||||.|.:.:..::::|..:|.:|.......|          .||:.:|.||
Yeast   341 EMLGIDRAKKKSVQSDLCLFIVDPTDLSKLLPEDILAHLSSKTFG----------NKRIIIVVNK 395

  Fly   371 TDTLTDEEHQQ-LDKLSN-------VLAISCHKPDKMPVFLGSLEKQLQELCGEPRAENPRITNT 427
            :|.::|:|..: |:||..       :|::||...:.:...:.:|....:.|.......:|.|.:.
Yeast   396 SDLVSDDEMTKVLNKLQTRLGSKYPILSVSCKTKEGIESLISTLTSNFESLSQSSADASPVIVSK 460

  Fly   428 RYRQQLER-CIENIDIFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH-ISCEDILDVVFKDFC 490
            |..:.|:. .:..::.|.:.  .|.:.|:.:|...||.:...|.:|||. |..|:|||.||..||
Yeast   461 RVSEILKNDVLYGLEEFFKS--KDFHNDIVLATENLRYASDGIAKITGQAIGIEEILDSVFSKFC 523

  Fly   491 IGK 493
            |||
Yeast   524 IGK 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18528NP_651251.3 trmE 24..493 CDD:235392 174/500 (35%)
TrmE_N 24..142 CDD:287381 48/135 (36%)
trmE 237..415 CDD:206727 67/185 (36%)
MSS1NP_013736.1 MnmE 38..526 CDD:223561 174/500 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345785
Domainoid 1 1.000 190 1.000 Domainoid score I640
eggNOG 1 0.900 - - E1_COG0486
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6600
Inparanoid 1 1.050 275 1.000 Inparanoid score I582
Isobase 1 0.950 - 0 Normalized mean entropy S1676
OMA 1 1.010 - - QHG62483
OrthoFinder 1 1.000 - - FOG0003953
OrthoInspector 1 1.000 - - oto99498
orthoMCL 1 0.900 - - OOG6_101467
Panther 1 1.100 - - LDO PTHR42714
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R753
SonicParanoid 1 1.000 - - X2256
TreeFam 1 0.960 - -
1615.740

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