DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18528 and gtpbp3

DIOPT Version :10

Sequence 1:NP_651251.3 Gene:CG18528 / 42906 FlyBaseID:FBgn0039189 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_004911076.1 Gene:gtpbp3 / 100490486 XenbaseID:XB-GENE-988214 Length:496 Species:Xenopus tropicalis


Alignment Length:481 Identity:223/481 - (46%)
Similarity:309/481 - (64%) Gaps:27/481 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TIYSLSSGHVKCGVSVIRVSGPQTKKALRAIVANKEYEPKARQAYLKSFYHPASKEMIDRGLLLW 88
            ||::|||||.||||||||.|||.:..||:.:...|:. |..|:..|.|...|.:.|::||||:||
 Frog    32 TIFALSSGHGKCGVSVIRTSGPASGDALQLLTGWKQL-PPPRRVTLTSLLCPTTGELLDRGLVLW 95

  Fly    89 FPGPASFTGEDSCEFQVHGSLAVIAAMLDALGKVDGLRPAEPGEFTKRAFFGGKLDLTEVEGLAD 153
            |.||.||||||.||:.|||..||:..:|.|||.|..||||||||||||||..|||||||.|||.|
 Frog    96 FSGPKSFTGEDCCEYHVHGGPAVVMGVLQALGTVQMLRPAEPGEFTKRAFQNGKLDLTEAEGLGD 160

  Fly   154 LIHAETEAQRKQALLQSTGALARLYDNWRRRLIRCAAHLEAYIDFAEEEQIEGGIILQLGKELKA 218
            |||||||.||:|||.|.:|.|.:||..|..||:...||:||:|||:|::.:|..::..:..|:|.
 Frog   161 LIHAETEIQRRQALRQMSGELGQLYQKWSHRLVTALAHVEAFIDFSEDDNVEENVLTSVDSEVKN 225

  Fly   219 VKREIREHLSDQRQGELLRDGVRTVIIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHN 283
            ::.|:.:||.|.|:||.||||:..|:.||.|.||||||||..|:..:||:...|||||::||:.|
 Frog   226 LQEELEDHLKDSRRGERLRDGLHLVLAGATNAGKSSLLNLTSQKPAAIVSPIPGTTRDVVETVLN 290

  Fly   284 FGGYPVVFSDTAGLRRYTTDSIEQEGMQRAKNCLVQSDLILLLAEAK-----NIAQLTHDDAVAP 343
            .|||||:.|||||||. :.|.:|:||::|||..|..:|:::.:.:|.     .|:.|.|..::..
 Frog   291 IGGYPVIMSDTAGLRD-SEDPVEKEGVRRAKERLDNADILIAVVDASKVPITRISILAHLKSLLS 354

  Fly   344 FVDSYLGELDIPLDMCSGKRLQLVANKTDTLTDEEH---QQLDK---LSNVLAISCHKPDKMPVF 402
            |..|. |:|         :.:.||.||:|.|....|   |:|.|   |.....:||.....:..|
 Frog   355 FPSSE-GKL---------REVLLVLNKSDLLDPPGHAKVQELCKDPELPTACFLSCQTGQGVGDF 409

  Fly   403 LGSLEKQLQELCGEPRAENPRITNTRYRQQLERCIENIDIFLRDYRPDVYPDMAIAASKLRNSVR 467
            :..|:::|:::||:|....|.:|.||:|..|.:|:|.::.: ..||..   |:.:||.:||.|.|
 Frog   410 IYILKQKLEKICGDPLHGAPSLTQTRHRLHLNKCLEALEQY-TIYREQ---DLVLAAEELRISYR 470

  Fly   468 CIERITGHISCEDILDVVFKDFCIGK 493
            .:..|||.:..|.|||::|:||||||
 Frog   471 ELGAITGRVGVEGILDIIFRDFCIGK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18528NP_651251.3 MnmE 24..493 CDD:440253 221/479 (46%)
gtpbp3XP_004911076.1 MnmE 32..496 CDD:440253 221/479 (46%)

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