DRSC/TRiP Functional Genomics Resources

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Protein Alignment Golgin84 and VIPAS39

DIOPT Version :9

Sequence 1:NP_651250.2 Gene:Golgin84 / 42905 FlyBaseID:FBgn0039188 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001180243.1 Gene:VIPAS39 / 63894 HGNCID:20347 Length:493 Species:Homo sapiens


Alignment Length:473 Identity:96/473 - (20%)
Similarity:151/473 - (31%) Gaps:158/473 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RRSMTSSTQSLSTSLKSTLSPVRRSG---ANSSSSVKSDGGVSVVTKDMRQKMTTSASFSNSPDI 101
            :|::.|....:.......|..|..||   .:.|.|::...|.|..|.:.|:::.:..|||:...:
Human    36 KRAVNSLRDFVDDDDDDDLERVSWSGEPVGSISWSIRETAGNSGSTHEGREQLKSRNSFSSYAQL 100

  Fly   102 SANSMDTNELAAF-------------KIALNEITAE---------RDELRLRLEDLNNE------ 138
             .....|..|::|             ..||::..|:         :.|.|    |.:|:      
Human   101 -PKPTSTYSLSSFFRGRTRPGSFQSLSDALSDTPAKSYAPELGRPKGEYR----DYSNDWSPSDT 160

  Fly   139 -----------TEKF-DLHQHTQVLEALVKSLSEERDKAVHDYNEAQAANMAYVHSISELETNLA 191
                       .|:| .|....|:||..|         ::||.|...|..:....::|: |....
Human   161 VRRLRKGKVCSLERFRSLQDKLQLLEEAV---------SMHDGNVITAVLIFLKRTLSK-EILFR 215

  Fly   192 KLQQEYISAAHKLQMQTKETEQQRQELQEYRIKAQRALQAKDSLIAELKAKPTEEGA------DP 250
            :|:...::..|.:.. .||...|:..|..:|...:                 |||.|      ..
Human   216 ELEVRQVALRHLIHF-LKEIGDQKLLLDLFRFLDR-----------------TEELALSHYREHL 262

  Fly   251 NLVSKDSETRFLQIEHESLKQELEHANEELQKARLQLDDYVSQERQRQVE-----LSSARQREET 310
            |:...|....||:     ....|..:.|:  .|.:| |.|...|||..:|     |.||.| .|.
Human   263 NIQDPDKRKEFLK-----TCVGLPFSAED--SAHIQ-DHYTLLERQIIIEANDRHLESAGQ-TEI 318

  Fly   311 LAKELRQAR---------------EHSVTSE----------------SDQRVLTQELASLRQQLS 344
            ..|..|:|.               .|...:|                ..|.|||...|..:.:..
Human   319 FRKHPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAW 383

  Fly   345 NQMAAAAT-----------------RLQEREQQLQQMRQRLSEEANTGAKSDYETRLKALT---- 388
            |.:.|..|                 |:.|...:.....|.|.|..|  ...|.:|:|...|    
Human   384 NDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVN--LVEDVDTKLNLATKFKC 446

  Fly   389 --------QSLVERQSLL 398
                    :.|.:||.||
Human   447 HDVVIDTYRDLKDRQQLL 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin84NP_651250.2 Golgin_A5 13..505 CDD:255554 96/473 (20%)
VIPAS39NP_001180243.1 Golgin_A5 26..471 CDD:255554 96/473 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..99 9/30 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..152 6/32 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4677
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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