DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Golgin84 and golga5

DIOPT Version :9

Sequence 1:NP_651250.2 Gene:Golgin84 / 42905 FlyBaseID:FBgn0039188 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_998576.1 Gene:golga5 / 406720 ZFINID:ZDB-GENE-040426-2749 Length:760 Species:Danio rerio


Alignment Length:776 Identity:176/776 - (22%)
Similarity:285/776 - (36%) Gaps:290/776 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SWITGLADKAENILNKLDQNAATALQTEN---------------------ATGSADPMRRSMTSS 46
            ||...||.|||:.|||:||.|||||...|                     |..|....|.|:::|
Zfish     2 SWFVDLAGKAEDFLNKVDQGAATALTKPNQKSSLSYNSPDATDSTQYNAAAYSSTQQHRDSISAS 66

  Fly    47 TQSLSTSLKSTLSPVRRSGA--------------------------------------------- 66
            :...||.:.:....:::|.|                                             
Zfish    67 SLGTSTFISAAAGNIKKSKATVLAGTANVSSTTPLGSSSKASSNFVRPRKSEVNDDLLFDFLNSS 131

  Fly    67 ---------------------------------------------------------NSSSSVKS 74
                                                                     |||....|
Zfish   132 DPPQSEKKEVRRETVSKAFSPTGVSAQSQMPTVSLASDLHTGPSVTPTPSSTQGLSRNSSLGSLS 196

  Fly    75 DGGVSVVTKDMRQKMTTSASFSNS------------PDISANSMD--------------TNELAA 113
            ....||.|:|...:..:.|....|            |.:...|.|              :|....
Zfish   197 SSSHSVKTEDSSTRDQSQADVPESLTAGLDDLADPQPVLEIQSQDLQQQQQQQGQEHVISNLRLE 261

  Fly   114 FKIALNEITAERDEL-----------------RLRLEDLNNETEKFD------------------ 143
            .::..||:::...|:                 |.|.:..|::..:.|                  
Zfish   262 NQLLRNEVSSLNQEMASLIQRAKDMQEEVNLGRARADKWNSDQSRVDRTVRELSSQVDDLTEALS 326

  Fly   144 ------------LHQHTQVLEALVKSLSE---ERDKAVHDYNEAQAANMAYVHSI---------- 183
                        |.:..|:|:|...:|.|   ||.:.:.|::|..:.:...|.::          
Zfish   327 AKDGQLAVLKVRLDEADQLLKARSSALEEAQNERVRILQDHSEGSSLHSQAVQTLQDRLRDAEAA 391

  Fly   184 ------------SELETNLAKLQQEYISAAHK-----------------LQMQTKET----EQQR 215
                        ||....|||::.|..:.|..                 ||.|.|.:    |..:
Zfish   392 VKREQESYRQIQSEFAARLAKVEAERQTLAESLTNAERRLTEEKQRAEDLQQQAKSSRSAAEYTK 456

  Fly   216 QELQEYRIKAQRALQAKDSLIAELKAKPTEEGADPNLVSKDSETRFLQIEHESLKQELEHANEEL 280
            ||||:|:.||.|.||:|:.||..||     ||:...::    |.....:|.|.|:.|.|...||:
Zfish   457 QELQDYKNKASRILQSKEKLINSLK-----EGSGLEVL----EGAGAGVELEELRHEKELQREEI 512

  Fly   281 QKARLQLDDYVSQ----ERQRQVELSSARQR----EETLAKELRQAREHSVTSESDQRVLTQELA 337
            ||.:.|:....::    |.|...|..|.|::    :|..|:::|..:|.....|..:    |||.
Zfish   513 QKLQAQIQSLRTEIQDLETQALTENESWREQLAEVQEQHAQQIRAKQEIEAELERSK----QELQ 573

  Fly   338 SLRQQLSNQMAAAATRLQEREQQLQQMRQRLSEEA-NTGAKSDYETRLKALTQSLVERQSLLERV 401
            .:.::..........|:::||.::|::|.:|:.:| :..::::.|.||..||::|:::|::||.:
Zfish   574 YIEEEHHRTKITLQGRVKDREDEIQKLRNQLTNKALSNSSQAELEGRLHQLTETLIQKQTMLEAL 638

  Fly   402 TSERNALRLQHEKAQTQLQ-----QN----MHLVEMESQRGSSRHTMLNSTDDVKAQFPLLMHPS 457
            .:|:|:|..|.|:.:.||:     ||    :::..||......|:|            |:|.  |
Zfish   639 GTEKNSLVFQLERLEQQLKSLQGGQNSASHINMAAMEGPGARQRNT------------PILF--S 689

  Fly   458 PFD---NRVARRFKRALRQADSMGIRVGTFLRRYPMMRVSVIVYVALLHLWVMFVLLSTTP 515
            ..|   ..|..:.::|....|...||:|.|||||||.||.||:|:||||||||.|||:.||
Zfish   690 DGDGPGTGVYGKVRKAASTIDRFSIRLGIFLRRYPMARVFVIIYMALLHLWVMIVLLTYTP 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin84NP_651250.2 Golgin_A5 13..505 CDD:255554 161/754 (21%)
golga5NP_998576.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..114 0/18 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..216 8/89 (9%)
Golgin_A5 266..740 CDD:255554 126/500 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..456 5/23 (22%)
DUF342 <468..593 CDD:302792 35/137 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594272
Domainoid 1 1.000 139 1.000 Domainoid score I4764
eggNOG 1 0.900 - - E1_KOG4677
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I4276
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1325011at2759
OrthoFinder 1 1.000 - - FOG0005421
OrthoInspector 1 1.000 - - oto40713
orthoMCL 1 0.900 - - OOG6_107022
Panther 1 1.100 - - LDO PTHR13815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2550
SonicParanoid 1 1.000 - - X5783
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

Return to query results.
Submit another query.