DRSC/TRiP Functional Genomics Resources

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Protein Alignment Golgin84 and Golga5

DIOPT Version :9

Sequence 1:NP_651250.2 Gene:Golgin84 / 42905 FlyBaseID:FBgn0039188 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001185933.1 Gene:Golga5 / 27277 MGIID:1351475 Length:729 Species:Mus musculus


Alignment Length:739 Identity:175/739 - (23%)
Similarity:294/739 - (39%) Gaps:247/739 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SWITGLADKAENILNKLDQNAATALQTENAT---------------------------------- 33
            ||...||.:||::||::||.|||||:.||.:                                  
Mouse     2 SWFADLAGRAEDLLNRVDQGAATALRKENTSNIFYSKNTDYPELQQQNTDSNYQTGQKANYISSA 66

  Fly    34 -------------GSAD------------------------------------------------ 37
                         |:|:                                                
Mouse    67 ADNIRHQKATILAGTANVKVGSRTVGDATHPTEHASAPRPSSQFVRRKKSEPDDELLFDFLNSSQ 131

  Fly    38 ----------------PMRRSMTSSTQSLSTSLKSTLSPVRRSGANSSS---SVKSDGGVSVVTK 83
                            |:..|..|...|::||:.:|    :..|.|:.|   .|.|...|..|.|
Mouse   132 KEPTGRVEVKKEKGRAPVSPSSPSGVSSVNTSVTTT----KAMGGNAGSQSPGVNSSDSVPEVHK 192

  Fly    84 DMRQKMT----TSASFSNSP-DISANSMD------------------TNELAAFKIALNEITAER 125
            :..::.|    ||...|::| |.|:.|.:                  ..|:|:......|...|.
Mouse   193 EPSEESTAPSATSEEHSSTPSDGSSRSQELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEEL 257

  Fly   126 DELRLRLEDLNNETEKFD------------------------------LHQHTQVL----EALVK 156
            ::.|:|:|..|.:..|.|                              |.:..|||    ||| :
Mouse   258 NKARVRVEKWNVDNSKSDRITRELRAQVDDLTEAVAAKDSQLAVLKVRLQEADQVLSSRTEAL-E 321

  Fly   157 SLSEERDKAVHDYNEAQA-ANMA---------------------YVHSISELETNLAKLQ----- 194
            :|..|:.:.:.|:.|..: .|.|                     |....||....|.|::     
Mouse   322 ALRSEKSRIMQDHKEGSSLQNQALQTLQERLHEADATLKREQESYKQMQSEFAARLNKMEVDRQN 386

  Fly   195 -QEYISAAHK-----------LQMQTK----ETEQQRQELQEYRIKAQRALQAKDSLIAELKAKP 243
             .|.::.|.:           ||.|.|    ..|..:|||.:|:.||.|.||:|:.||..||...
Mouse   387 LAEAVTLAERKYSEEKKKVDELQQQVKLHRASLESAKQELVDYKQKATRILQSKEKLINSLKEGS 451

  Fly   244 TEEGADPNLVSKDSETRFLQIEHESLKQELEHANEELQKARLQLDDYVSQ----ERQRQVELSSA 304
            :.||.:.:..|        .:|.|.|:.|.|...||:||...|:....|:    |.|:..|..||
Mouse   452 SFEGLESSTAS--------SMELEELRHEKEMQKEEIQKLMGQMHQLRSELQDMEAQQVSEAESA 508

  Fly   305 RQREETLAKELRQAREHSVTSESDQRVLTQELASLRQQLSNQMAAAATRLQEREQQLQQMRQRLS 369
            |::.:.|..::.:.|......|::...:.||...:.:.|........:|:::||:::|::|.:|:
Mouse   509 REQLQDLQDQIAKQRTSKQELETELERMKQEFRYMEEDLHRTKNTLQSRIKDREEEIQKLRNQLT 573

  Fly   370 EEA-NTGAKSDYETRLKALTQSLVERQSLLERVTSERNALRLQHEKAQTQLQQNMHLVEMESQRG 433
            .:. :..::|:.|:||..||::|:::|::||.:::|:|:|..|.|:    |:|.:|........|
Mouse   574 NKTLSNSSQSELESRLHQLTETLIQKQTMLESLSTEKNSLVFQLER----LEQQVHSASSGPNSG 634

  Fly   434 SSRHTMLNSTDDVKA----QFPLLMHPSPFDNRVARRF---KRALRQADSMGIRVGTFLRRYPMM 491
            |:.:  ::..|..:.    ..|:|.:.:  :..:|..:   ::|....|...||:|.||||||:.
Mouse   635 SAIN--MSGVDSGEGTRLRNVPVLFNDT--ETNLAGMYGKVRKAASSIDQFSIRLGIFLRRYPIA 695

  Fly   492 RVSVIVYVALLHLWVMFVLLSTTP 515
            ||.||:|:||||||||.|||:.:|
Mouse   696 RVFVIIYMALLHLWVMIVLLTYSP 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin84NP_651250.2 Golgin_A5 13..505 CDD:255554 162/717 (23%)
Golga5NP_001185933.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..222 23/136 (17%)
Smc <231..565 CDD:224117 78/342 (23%)
Golgin_A5 418..723 CDD:370692 99/318 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 626..645 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848748
Domainoid 1 1.000 150 1.000 Domainoid score I4371
eggNOG 1 0.900 - - E1_KOG4677
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I4258
Isobase 1 0.950 - 0 Normalized mean entropy S4951
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005421
OrthoInspector 1 1.000 - - oto94435
orthoMCL 1 0.900 - - OOG6_107022
Panther 1 1.100 - - LDO PTHR13815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2550
SonicParanoid 1 1.000 - - X5783
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.730

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