DRSC/TRiP Functional Genomics Resources

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Protein Alignment Golgin84 and Vipas39

DIOPT Version :10

Sequence 1:NP_651250.2 Gene:Golgin84 / 42905 FlyBaseID:FBgn0039188 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001136052.1 Gene:Vipas39 / 104799 MGIID:2144805 Length:491 Species:Mus musculus


Alignment Length:263 Identity:53/263 - (20%)
Similarity:94/263 - (35%) Gaps:51/263 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QTENATGSADPMRRSMTS------------STQSLSTSLKSTLSPVRRSGANSSSSVKSDGGVSV 80
            :|..::||....|..:..            ||.|||:..:....|   ....|.|...||.....
Mouse    73 ETAGSSGSTPEGREQLKGRNSFYTQLPKPPSTYSLSSFFRGRTRP---GSFQSLSDALSDTPAKS 134

  Fly    81 VTKDMRQKMTTSASFSNSPDISANSMDT-NELAAFKI-ALNEITAERDELRLRLEDLNNETEKFD 143
            ...::.:.......:||...:|    || ..|...|: :|....:.:|:|:|    |.......|
Mouse   135 YAPELGRPKGEYRDYSNDWSLS----DTVQRLRRGKVCSLERFRSLQDKLQL----LEEAVSMHD 191

  Fly   144 LHQHTQVLEALVKSLSEE---RDKAVHDYNEAQAANMAYVHSISELETNLAKL-------QQEYI 198
            .:..|.||..|.::||:|   |:..|.     |.|....:|.:.|:......|       :.|.:
Mouse   192 GNVITAVLIFLKRTLSKEILFRELEVR-----QVALRHLIHFLKEIGDQKLLLDLFRFLDRAEEL 251

  Fly   199 SAAHKLQMQTKETEQQRQELQEYRI----KAQRALQAKD-------SLIAELKAKPTEEGADPNL 252
            :.:|..:....:..::|:|..:..|    .|:.|...:|       .:|.|...:..|.....::
Mouse   252 ALSHYREHLNIQDPEKRKEFLKTCIGLPFSAEDAAHVQDHYTLLERQIIIEANDRHLESSGQTDI 316

  Fly   253 VSK 255
            ..|
Mouse   317 FRK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin84NP_651250.2 hsdR 136..>230 CDD:236912 22/107 (21%)
Golgin_A5 210..515 CDD:462900 10/57 (18%)
Vipas39NP_001136052.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..101 4/27 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..141 4/19 (21%)

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