DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6432 and acsm3

DIOPT Version :9

Sequence 1:NP_001287502.1 Gene:CG6432 / 42901 FlyBaseID:FBgn0039184 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:608 Identity:147/608 - (24%)
Similarity:240/608 - (39%) Gaps:103/608 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VQNPAAFWEEQGNLLDWDRPWEKVLDNSNPPFTKWYVGGYLNACYNSIDRHILAGRGSNVAL-IH 99
            :|.|..|...:..|..|:.. ||....|:.|...|            ::.|....|.|...| .|
Zfish    55 IQVPQRFNFAKDVLEKWETK-EKSGQRSSLPALWW------------VNDHGTEVRWSFEELGFH 106

  Fly   100 DSPLTGTLRRVTYQELYDQIVLLAGGLAKLGVVKGDRVVIYMPLIPETIIAMLAIVRLGAIHSVV 164
            ...|...||:|...|                  :||||.:.:|.:||..:..:|.:|.|.:....
Zfish   107 SRKLANVLRQVCSLE------------------RGDRVFLILPRVPEWWLVNVACIRTGTVLIPG 153

  Fly   165 FGGFAARELCSRIEHVEPKLVIASNVGVEPGKVVPYLD------------ILHSAISMSRWRPPQ 217
            .....||::..|:.....|.||....      :.|.||            :|.|...|..|    
Zfish   154 TSQLTARDMRHRLITSGAKCVITDET------LAPLLDTVALDCPSISTKLLLSHKPMDGW---- 208

  Fly   218 RNIIFRRDNVSPDTTKLDPLTDVLWSDILKMAEGERPIACVPIEANDPLYILYTSGTTDKPKGVL 282
            .|:......||.|.                        .||...:.:|:.|.:|||||..||...
Zfish   209 GNLTELMGRVSDDH------------------------VCVDTSSEEPMTIFFTSGTTGSPKMTQ 249

  Fly   283 RTIGGHLVALVYTLRTLYGINPGHTWWAASDMGWVVGHSYICYGPLCLGATSVMYEGKPDRTP-- 345
            .:...:.:.|....|....:.....:|..||.||........:.|...||...::     ..|  
Zfish   250 HSHCSYGLGLTVNGRYWLDLTEQDVFWNTSDTGWAKSAWSSVFAPWIQGACVFVH-----HMPRF 309

  Fly   346 DPGQYFRIIDQYQVRSIFSVPTSFRVIRRADPDISYGRQYSMKSLRAIFIAGEHCDYETK-SWIE 409
            |.....:.:..|.:.:..:.||::|::  ...|:|   :|..::|.....|||..:.|.. .|.|
Zfish   310 DTNTVLKTLSHYPITTFCTAPTAYRML--VQDDLS---KYKFQALEHCLCAGEPINPEVMCKWKE 369

  Fly   410 KTFKVPVLNHWWQTETGSAVTATCLGFQQNLSPPTYSTGLPLMGYDVKILKADGSEAQTSELGRI 474
            .| .:.:...:.|||| ..:..|..|.:  :.|.::....|  ||||:::..:||.....:.|.:
Zfish   370 LT-GLDIYEGYGQTET-VLIAGTFKGMK--IKPGSFGKASP--GYDVQVVDENGSVVPKGQEGDL 428

  Fly   475 ALKL-PLPPGNMATLYKNEELFRTLYFQKFPG-YYDTMDAGYKDERGYIFVTARDDDVINVAGHR 537
            .::: |..|.::.|.|..|.: ||.  :.|.| :|.|.|.|..|:.||::...|.||||..||:|
Zfish   429 GIRVKPERPFSLFTEYTGEPV-RTA--ECFRGDFYLTGDRGMMDDEGYLWFIGRSDDVILSAGYR 490

  Fly   538 LSTSSLEDAVLRHPDVVDVAVFGVPEATKGQVPLCLYIPVENCK-KTDAKLSTEIIKLIRDVVGP 601
            :....:|:|::.||.|.:.||...|:..:|:|.....:...:.| :...:|..|:...::.:..|
Zfish   491 IGPFEVENALIEHPAVAESAVVSSPDPVRGEVVKAFVVLTADFKSRAHKELIKELQTHVKSITAP 555

  Fly   602 IAAFRLVTSVNNLPRTRSGKTMR 624
            ....|.:..|:.||:|.|||..|
Zfish   556 YKYPRKIEFVDQLPKTVSGKIRR 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6432NP_001287502.1 prpE 28..657 CDD:182517 147/608 (24%)
PrpE 37..651 CDD:213314 147/607 (24%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 147/608 (24%)
AFD_class_I 57..586 CDD:302604 146/606 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.