DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dis3 and dis3l2

DIOPT Version :9

Sequence 1:NP_001262910.1 Gene:Dis3 / 42900 FlyBaseID:FBgn0039183 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_031757683.1 Gene:dis3l2 / 780265 XenbaseID:XB-GENE-5958094 Length:1068 Species:Xenopus tropicalis


Alignment Length:902 Identity:277/902 - (30%)
Similarity:441/902 - (48%) Gaps:181/902 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 DDHLQASQS--------SKEFERSG--KAATRVVLLTDDAA-----NRAK--AEAEGILVTTAAE 202
            |.|.|.:||        |:|....|  :...|....::.|.     ||.:  :|::|..:.. :|
 Frog   176 DTHKQKAQSQTSTKGSQSEELLEGGNKRGFHRTRNQSESACAPPSLNRKRQLSESQGETMHN-SE 239

  Fly   203 YVKSLE-------DFPLLMDKLSHKTFDSEKNGLPQYPPHLSMKELLEGLRQNKLLQGTFQASRE 260
            ::..::       :..:|.:|.|.|   .:|..:  :..:::.:|:..||::.:|:||..:.:.:
 Frog   240 FLSPVQSGTQRGTNRSILNNKKSGK---GKKKSV--FEAYMTKEEVSAGLKRGELIQGPLRINPK 299

  Fly   261 NYLEGTVNVEKFEKGILIQGRESLNRAVDGDLVAVELLPEAEWSAPSEIVLEEKNVYADEVPS-- 323
            .:.|..:......:.:.|.|....|||::||:|.|:|||:.:|......|.|:     |:.|.  
 Frog   300 KFHEAYLPSPDGVRDLFIDGVVPRNRALNGDVVVVKLLPQEQWKVLKNDVCED-----DDTPGHS 359

  Fly   324 ----------------------------EERAKD----------ENEMLNQVRAAALSAERT--- 347
                                        :..|:|          :.|:.:|.:..|:. |:|   
 Frog   360 TGNKQHALSPHLMKSSAKNPDLIIEAKVDSSAEDGHESALIGCLQKEIKDQDKLGAIE-EKTSKQ 423

  Fly   348 ------------PTGRIVGIVRRKW-RQYCGILQPSLIEDTN------RHIFVPADRKIPRIRI- 392
                        .|.::|.|:.:|. |...|.::|  :.|.:      |.:|.|.|.::|||.: 
 Frog   424 GDPKTFSDDCFQKTAKVVYILEKKHSRAATGFIKP--LSDKSSDLARKRALFSPVDHRLPRIYVP 486

  Fly   393 ------------ETRQAAMLQNQRIIVTIDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHD 445
                        ||     ..|...|.:|..|..:|.:..|..::|||..|::..|.|.||:|:.
 Frog   487 LGDCPHDFAIHPET-----YANTLFICSITAWRDDSNFAEGKLMKSLGQAGEIEPETEGILVEYG 546

  Fly   446 VPHCKFSDEVLSFLPK-MPWTITDEDYSKRVDLRDLYICSVDPPGCTDIDDALHCKELPNGNLEV 509
            |....|.|:||..||: :||||..|::.||.|||:..|.::||....|:||||.||.||:||.||
 Frog   547 VDFSDFPDKVLQCLPQDLPWTIPQEEFQKRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEV 611

  Fly   510 GVHIADVSHFIRPGNALDMEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVD 574
            ||||||||:|:..|:|||:.|:.|.|:||||.|.|.|:|.||...||||....:|..||.:|::.
 Frog   612 GVHIADVSYFVAEGSALDIMASERATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKIT 676

  Fly   575 NEANVLSKRFHKSVIKSKRAMTYEEAQNII---DDATQQ------------NEIAKSLRNLNRLA 624
            .:..:|.:.|.:|||.|...::|:.|||:|   |...:|            |||.:::.||:.:|
 Frog   677 PQGEILDEWFGRSVICSCVKLSYDHAQNMINHPDKKIEQHELPPVSPQHTINEIHQAVLNLHLIA 741

  Fly   625 KILKKRRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEF 689
            :.|:|:|.|:|||.|...::.|.:|.|:..|....:.|.|::|.:|||||||||:.||.||...|
 Frog   742 QNLRKQRFDDGALRLDQLKLTFTLDKESGLPQGCYIYQYRDSNKLVEEFMLLANMAVAHHIYRRF 806

  Fly   690 SECAVLRRHPRPPPTNFDPLVKSARYQGFQVDINSGLELSHSLDKCVKADNPYFNTMIRILTTRC 754
            .|.|:|||||.|.....:.|::.....|.|:|.:|...|..||:...:.|. |......:||..|
 Frog   807 PEEALLRRHPPPQTKMLNDLIEFCDQMGLQLDFSSSGTLHKSLNDQFETDE-YSAARKEVLTNMC 870

  Fly   755 ---MMQAVYFISGSLQKEEFF-HYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY---AQ 812
               |..||||.:|:|:.|..| ||.|..|:||||||||||::|::||||||||:|.....   .:
 Frog   871 SRPMQMAVYFCTGALKDETLFHHYALNVPLYTHFTSPIRRFADVIVHRLLAASLGCGPPLKMPKE 935

  Fly   813 LLDRKSNEELCHNLNYRHKMAQYAGRASVALNTHLFFR--GKE---EDEEGYVLFVRKNALQVLI 872
            ::.::::.  |::.....|..|       .|:..|||.  .||   .:.|..|:.|...|..|::
 Frog   936 VIQKQADH--CNDRKTASKRVQ-------ELSAELFFSVFVKECGPLESEAMVMGVLNEAFDVIV 991

  Fly   873 PKYGLEGTLYLKS-----------------------DKDGKDGVERVKSEIVFTFNE 906
            .::|::..:|..|                       :|.|::.|.:|.|  :||..|
 Frog   992 LRFGVQKRIYCNSLPLVNSHFQQVGKRPELTLLWEPEKKGEEPVRQVIS--IFTLVE 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dis3NP_001262910.1 PIN_Rrp44 9..203 CDD:189032 14/64 (22%)
VacB 249..945 CDD:223631 254/784 (32%)
RNB 474..802 CDD:279157 152/346 (44%)
dis3l2XP_031757683.1 Rrp44_CSD1 271..443 CDD:375054 33/177 (19%)
VacB 435..1055 CDD:223631 226/631 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104619at2759
OrthoFinder 1 1.000 - - FOG0000674
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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