DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ASCL1 and Fer3

DIOPT Version :10

Sequence 1:NP_004307.2 Gene:ASCL1 / 429 HGNCID:738 Length:236 Species:Homo sapiens
Sequence 2:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster


Alignment Length:221 Identity:56/221 - (25%)
Similarity:88/221 - (39%) Gaps:70/221 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    13 GQQPQPQPQQPFLPPAACFFATAAAAAAAAAAAAAQSAQQQQQQQQQQQQAPQLRPAADGQPSGG 77
            ||:..|.|..|:....|.|..|..:.               .|:.|.....|| ||:.:|:.:| 
  Fly    23 GQEAPPPPIVPYQELIAGFPCTDLSL---------------WQRSQVTPLVPQ-RPSTNGRANG- 70

Human    78 GHKSAPKQVKRQRSSSPELMRCKRRLNFSGFGYSLPQQQPAAVARR---NERERNRVKLVNLGFA 139
                          ||....:.:||:              |::|:|   |.|||.|:..:|..|.
  Fly    71 --------------SSSSSKKTRRRV--------------ASMAQRRAANIRERRRMFNLNEAFD 107

Human   140 TLREHVPNGAANKKMSKVETLRSAVEYIRALQQLL------------DEHDAVSAAFQAGVLSPT 192
            .||..||..|..|::|::||||.|:.||..:.:||            |.:.:::...||.  .|.
  Fly   108 KLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLSGTPSNSHKSRSDVYGSMNGHHQAP--PPA 170

Human   193 ISPNYSNDLNSMAGSPVSSYSSDEGS 218
            |.|::.:        |.::|..|..|
  Fly   171 IHPHHLH--------PAAAYQRDFAS 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ASCL1NP_004307.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..98 10/55 (18%)
bHLH_TS_ASCL1_Mash1 115..185 CDD:381585 27/84 (32%)
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 26/76 (34%)

Return to query results.
Submit another query.