DRSC/TRiP Functional Genomics Resources

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Protein Alignment ASCL1 and sc

DIOPT Version :10

Sequence 1:NP_004307.2 Gene:ASCL1 / 429 HGNCID:738 Length:236 Species:Homo sapiens
Sequence 2:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster


Alignment Length:187 Identity:61/187 - (32%)
Similarity:93/187 - (49%) Gaps:29/187 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    63 APQLRPAADGQPSGGGHKSAPKQVKRQRSSSPELMRCKRRLNFSGFG-----YSLPQQQPAAVAR 122
            :|.:......||:|    :.|.:.::.......|.||...::....|     |::.|.|  :|.|
  Fly    45 SPLIPGGNQNQPAG----TMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQ--SVQR 103

Human   123 RNERERNRVKLVNLGFATLREHVPNG-----------AANKKMSKVETLRSAVEYIRALQQLLDE 176
            ||.|||||||.||..||.||:|:|..           ..:||:|||:|||.||||||.||.|:|:
  Fly   104 RNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDD 168

Human   177 HD------AVSAAFQAGVLSPTISPNYSNDLNSMAGSPVSSYSSDEGSYDPLSPEEQ 227
            .:      |.:|..|. .|....|.::|:..::.:.|..::|..:..|..||..::|
  Fly   169 LNGGSNIGANNAVTQL-QLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQ 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ASCL1NP_004307.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..98 6/34 (18%)
bHLH_TS_ASCL1_Mash1 115..185 CDD:381585 40/86 (47%)
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 35/65 (54%)
Blue background indicates that the domain is not in the aligned region.

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