Protein Alignment Rrp5 and rpsA

DIOPT Version :10

• Sequence 1: NP_651245.1
• Gene: Rrp5 / 42899
• FlyBaseID: FBgn0039182
• Length: 1430
• Species: Drosophila melanogaster
• Sequence 2: NP_415431.1
• Gene: rpsA / 945536
• ECOCYCID: EG10900
• Length: 557
• Species: Escherichia coli
• Alignment Length: 709
• Identity: 148/709 - (20%)
• Similarity: 244/709 - (34%)
• Gaps: 236/709 - (33%)

  Fly   281 MNESFSAYVNEHHLANALDTLDAYELNEDYNARVLYVMPLTKLVYLTLNLDIKTGAAVAKDQDEE 345
            |.|||:....|        :|...|.......|.: |:.:.|.|.| ::..:|:.:|:..:|.:.
E. coli     1 MTESFAQLFEE--------SLKEIETRPGSIVRGV-VVAIDKDVVL-VDAGLKSESAIPAEQFKN 55

  Fly   346 EQEVEPIKVGSVVEKAKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTK 410
            .|....|:||..|:.|........|..||..:|.|                             :
E. coli    56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAK-----------------------------R 91

  Fly   411 HKVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDLVTAKIFKKDDKIK-GWSVRIGKVNGI 474
            |:..|    .:|..|                ||   .:.||..|   :.|:| |::|.:..:...
E. coli    92 HEAWI----TLEKAY----------------ED---AETVTGVI---NGKVKGGFTVELNGIRAF 130

  Fly   475 LEQFYLAPNVRYDV----------GQSLKCRVLEVNAERKICYVSNRA--------------EYL 515
            |      |....||          |:.|:.:|::::.:|....||.||              |.|
E. coli   131 L------PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189

  Fly   516 GKG------IKILTDYASAHVGNVYMGTVVRCEDTYVLVKFGNGIKGVLHRQNL--------KEN 566
            .:|      :|.||||.:                   .|..| |:.|:||..::        .|.
E. coli   190 QEGMEVKGIVKNLTDYGA-------------------FVDLG-GVDGLLHITDMAWKRVKHPSEI 234

  Fly   567 SSFFEGQTTKFRILTRNKDQITLTLPEDKFQLGEICPV--------------EITNALDAGLEVK 617
            .:..:..|.|.....|.:.:::|.|.    ||||...|              .:||..|.|..|:
E. coli   235 VNVGDEITVKVLKFDRERTRVSLGLK----QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295

  Fly   618 I-------TFAAEDDEEDEDGNPKLEEFVGLIPLRLLSD------HLELLHAQMRVHP----AGS 665
            |       ...:|.|..:::.:|.....||.:...::.|      .:.|...|.:.:|    |.:
E. coli   296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360

  Fly   666 YTDAACIMQNIFSLRDVPYFSG---------QLTKDWQSVQVGDIIRSYVKHATDQVVDLMVCVR 721
            :.....:...|.|:.|...|.|         .|:....:|...:.:|.|.|  .|::..:::.|.
E. coli   361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK--GDEIAAVVLQVD 423

  Fly   722 NYNKPVKVHVKMLRLNAVKNAPVELVPEQLLWVKVLSKE---VETKTLTVSAKLTDVWSGDLSDT 783
            ...:.:.:.||.|..:...|           || .|:|:   |..|...|.||      |...:.
E. coli   424 AERERISLGVKQLAEDPFNN-----------WV-ALNKKGAIVTGKVTAVDAK------GATVEL 470

  Fly   784 AKLVEGYLNEVAQIKAGLEEASAPISKYSVGEKINVVFKGIDATTNDWVYTVEGNGKVSALLLSS 848
            |..|||||......:..:|:|:..:   |||:::...|.|:|.             |..|:.||
E. coli   471 ADGVEGYLRASEASRDRVEDATLVL---SVGDEVEAKFTGVDR-------------KNRAISLS- 518

  Fly   849 LVGTAKAPEMGSKHEAVILWIEYSSDVLLISNKKLDIAHISPSGELSTNLIGKAGMKAK 907
                     :.:|.||      ...|.:...||:.|       ...|.|.:.:|...||
E. coli   519 ---------VRAKDEA------DEKDAIATVNKQED-------ANFSNNAMAEAFKAAK 555

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp5	NP_651245.1	S1_Rrp5_repeat_hs1_sc1	71..165	CDD:240198
		S1_like	172..243	CDD:471952
		S1_like	261..327	CDD:471952	11/45 (24%)
		S1	530..591	CDD:197648	11/68 (16%)
		PTZ00121	<981..>1220	CDD:173412
		LapB	1134..1344	CDD:442196
		TPR repeat	1320..1350	CDD:276809
		TPR repeat	1355..1382	CDD:276809
rpsA	NP_415431.1	rpsA	1..557	CDD:235775	148/709 (21%)