Sequence 1: | NP_651245.1 | Gene: | CG5728 / 42899 | FlyBaseID: | FBgn0039182 | Length: | 1430 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013956.1 | Gene: | RRP5 / 855269 | SGDID: | S000004842 | Length: | 1729 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1771 | Identity: | 362/1771 - (20%) |
---|---|---|---|
Similarity: | 669/1771 - (37%) | Gaps: | 433/1771 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 EKSFPRGGT-----IHSEVKTDDVSLNIVFG-----ASQK-----KVKKAPKVKENLLSYETEEQ 54
Fly 55 NGQLEAFSAETLNMDTLQEDMLVMGVVKELTATALQIALPGRMFARTLVADISDAYTRVAK---A 116
Fly 117 AMSGDT------------SEYH----------------DLTELFQLGRIVYGKAIKTEKLD---- 149
Fly 150 -TGRVSLLLSLKPADVHGNLH-HKSIKKGFIFSGAVAEALEHGYVIESGVQGLQAFVPCEKP--- 209
Fly 210 AQKLHVGQLAFLKVKTVHHDTHQSTCTCVQVEQDQLRIKSQNETNLDYILPGSIVKFKVAKHLKD 274
Fly 275 GLKGSIMNESFSAYVNEHHLA--NALDTLDAYELNEDYNARVL---------YVMPLTKLVYLTL 328
Fly 329 NLDIKTGAAVAKDQDEEEQEVEPIKVGSVVEKAKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFK 393
Fly 394 GNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDL--------- 449
Fly 450 ----VTAKI-------------------------FKKDDKIKG---------------------- 463
Fly 464 -------------------------WSVRIGKVNG-----------------ILEQFYLAPNVRY 486
Fly 487 DVGQSLKCRVLEVNAERK----ICYVSNR--------AEYLGKGIKILTDYASAHVGNVYMGTVV 539
Fly 540 RCEDTYVLVKFGNGIKGVLH------------RQNLK------ENSSFFEGQTTKFRILTRN--- 583
Fly 584 ---KDQITLTLP---EDKFQLGEICPVE--ITNALDAGLEVKI----------TFAAEDDEEDED 630
Fly 631 GNPKLEEFVGLIPLRLLSDHLELLHAQMRVHPAGSYTDAACIMQNIFSLRDVPYFSGQLTKDWQS 695
Fly 696 VQVGDIIRSYVKHAT-------------------------DQVVDLMVCVRNYNKPVKVHVKMLR 735
Fly 736 LNAVKNAPVELVPEQLLWVKVL----------SKEVETKTL---TVSAKLTDVWSGDLSDTAKLV 787
Fly 788 EGYLNEVAQIKAGLEEASAPISKYS--------VGEKINVVFKGIDATTNDWVYTVEGNGKVSAL 844
Fly 845 LLSSLVGTAKAPEMGSKHEAVILWIEYSSDVLLISNKKLDIAHISPS-GELSTNLIGKAGMKAKV 908
Fly 909 --LLKLESVAVCSLKKGTNPLVICPIRLHPNDIENSGSAELRQGDFCN-----------IAFIHD 960
Fly 961 KLHIAVP-----ETVWRLWRGVKRTAGTEVAPVKAKKAKVEESPKQKKTTIEETSAQKKVKAKAK 1020
Fly 1021 V-ETKTEAKA-------IPTKRKAEVVEKITNGQKKT--QPLTNGIVKEKPKQNGKLF-FEDK-- 1072
Fly 1073 ------TPAKNAKSETPKSNGAEGKSRLPGVSSFW----------EDDVNQSKEGSSDEDEELNV 1121
Fly 1122 AETQKNAAKKK--------RLSA--------KEKAKAEIKEEQ--------------RLRE--IE 1154
Fly 1155 ERNADPKARL-ETIDQYERLVIAQPNNSISWLKYIAFLLSNTEIEKARALARRAISTISFRETQE 1218
Fly 1219 LRNMWSALLNMELVY--SNNFDDVLKEALNCNDPLEIYISVVDILKKNKRKDRLSSVLTTVLNKF 1281
Fly 1282 KTE-LRVWPVAAEAYFWLGKSDQVHNLLQRALRALPNQEHIPCIVSFAKL-YAKHDNNDMAQTLL 1344
Fly 1345 DDVVTSYPKRIDIWSVYVDMLIKAGLIDSARNVLERAVVQKLKPNKMQVIYKKYLQLEENHGTDA 1409
Fly 1410 TVAKVKQQAEQWVKNY 1425 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5728 | NP_651245.1 | S1_Rrp5_repeat_hs1_sc1 | 71..165 | CDD:240198 | 21/129 (16%) |
S1_like | 172..243 | CDD:299122 | 17/73 (23%) | ||
S1_like | 261..327 | CDD:299122 | 16/76 (21%) | ||
S1 | 530..591 | CDD:197648 | 13/84 (15%) | ||
TPR | 1170..1403 | CDD:223533 | 78/236 (33%) | ||
TPR repeat | 1320..1350 | CDD:276809 | 10/30 (33%) | ||
TPR repeat | 1355..1382 | CDD:276809 | 11/26 (42%) | ||
RRP5 | NP_013956.1 | S1_Rrp5_repeat_hs1_sc1 | 116..246 | CDD:240198 | 22/131 (17%) |
RpsA | 276..888 | CDD:223613 | 121/662 (18%) | ||
RpsA | 801..1385 | CDD:223613 | 109/621 (18%) | ||
TPR | <1458..1667 | CDD:223533 | 73/209 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157344840 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0539 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 225 | 1.000 | Inparanoid score | I756 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5233 |
OMA | 1 | 1.010 | - | - | QHG57197 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005259 | |
OrthoInspector | 1 | 1.000 | - | - | oto99034 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100538 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23270 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1223 |
SonicParanoid | 1 | 1.000 | - | - | X3781 | |
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.830 |