DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BRWD3 and AT5G49430

DIOPT Version :9

Sequence 1:NP_732982.1 Gene:BRWD3 / 42898 FlyBaseID:FBgn0011785 Length:2232 Species:Drosophila melanogaster
Sequence 2:NP_001318768.1 Gene:AT5G49430 / 835003 AraportID:AT5G49430 Length:1677 Species:Arabidopsis thaliana


Alignment Length:1707 Identity:397/1707 - (23%)
Similarity:647/1707 - (37%) Gaps:496/1707 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSSGDDLKPELYFLISKFLAAGPLEETAKVLIRELEEKKVLPRRLD-W-------------QGNE 56
            |:...||: |:|||:...|::||.::|..:|..||.|.::||||.. |             .||.
plant    43 PNIDLDLR-EVYFLMLHLLSSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNS 106

  Fly    57 HEQTFEELERKYKHIGANHLLEICSRLGPLVDRELPPS---------VPGINSLLGTGRQNLLRT 112
            ....:.||.::|.|:..:||:|:..:|..:.:|..|..         ..|:.:|||||..:||.:
plant   107 FPLNYTELAKRYSHVKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSS 171

  Fly   113 -KETVYCHRSLRDYCTRLNGVSL--PDSVLTKPTHNLDRV--LTGREHGGEVRRK---------- 162
             ||.|              |..|  |...:..|..:.|:|  ::.||.||...|.          
plant   172 DKEIV--------------GSDLKPPPIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAAC 222

  Fly   163 --LLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTGRYIITGADDLLIKIWSAADGRLLATLRGAS 225
              :..|:.:.::.:.::|..||.::|||.:.||:|||:|||:||.|:|:||......||:.||..
plant   223 YVIAKPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHE 287

  Fly   226 SEITDIAINLDNTMLAAGSLDHILRVWDMQTTSPIAVLSAHTGMITSVNFCPSPRSDLKYLVTTS 290
            .:|||:|::.:|..:|:.|.|.::|||.:....|::||..|||.:|::.|.|.|.|..: |:::|
plant   288 GDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQ-LLSSS 351

  Fly   291 TDGSIAFWQYSTPRGQKITFAPK------PTQYHEKLRPGQA------QMMCTTFSPGGIFLAAG 343
            .||:...|.   .||.:  |||:      |:...:...|..:      |:.|..|:..|.....|
plant   352 DDGTCRIWD---ARGAQ--FAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNASGSVFVTG 411

  Fly   344 SADHHVRVYMM------GEDGPKR------ILETEAYTDAVDSVQWS--HRGLRF---------- 384
            |:|...|||.:      ..|.|::      :|  ..:.:.|:.||:|  ..|.:|          
plant   412 SSDTLARVYSVWSANKTNTDDPEQPNHEMDVL--AGHENDVNYVQFSGCAAGSKFSVTDYSKDEN 474

  Fly   385 --------------ISGSKDGTAHIW--TFESQQWKSSKLCMTERLASCP------EPEEGKRLK 427
                          ::.|:||:|.||  .......||.:......|...|      .|..|.|.:
plant   475 VPKFKNSWFCHDNIVTCSRDGSAIIWIPRLRRSHGKSCRWTRAYHLKVPPPPMPPQPPRGGPRQR 539

  Fly   428 -------VTMVAWDASDRYVITAVNDFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRDEHVLLS 485
                   |.|:||...:|:|:.|:.|..|.:|::....|...|.||....||::.:|.:..:.:|
plant   540 ILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMS 604

  Fly   486 AGHDGQVFLWDIEQGVCVANFLNDIDGQGHGSVFDAKWSPDGTMIAATDSHGHILIFGLGVCIEK 550
            ||:||:..:|||.:|:.:.  :.||   .|..:.|.|:|||||.|..:|..|.:.|...|.. :.
plant   605 AGYDGKTIVWDIWEGIPIQ--IYDI---SHYKLVDGKFSPDGTSIILSDDVGQLYILSTGQG-DS 663

  Fly   551 YKMLPTELFFHTDFRPLLRDAQHHVVDEQTQIMPHL--MPPPFLVDADGNPHPSRFQRFVPGRES 613
            .|....:.||..|:|||::|...:|:|:::|:.|:.  |..| |.|:...|:...:|.....|..
plant   664 QKDAKYDQFFLGDYRPLIQDTYGNVLDQESQLQPYRRNMEDP-LCDSGMIPYEEPYQTTFQKRRL 727

  Fly   614 CSL-DQLIPN---LTVGVDGVVIDDGGAGGDAVVAAAPAEAPPAA-------LP----------- 656
            .:| .:..|:   |.||.| :.:|            ...:.||.|       ||           
plant   728 GALGKEWRPSSLKLAVGPD-ITLD------------RDYQMPPLADLDLAEPLPEFIDVMEWEPE 779

  Fly   657 -------------------------------PAAAGGPQGANYSHIDRMIAALANRQSVNVNAND 690
                                           ...:|...|.:|...|...:...:::..:.....
plant   780 VDILSDENDSEYNVPEEYSSGKEQECLNSSTSGESGSSSGESYEDDDHQNSLRRSKRKKHKKEAG 844

  Fly   691 ANPTNG----NQSFERL------TNRQMPDSNGRQSSRGNVLGSRLSTPRQ-------GW----- 733
            ...::|    .::|:.|      ..|.....:||:.|:.....|:.|.||:       .|     
plant   845 IMTSSGRRVKKRNFDELEGAPSNKKRTRKSRSGRKESKRKSSKSKSSRPRRAAARNALSWFSKIT 909

  Fly   734 GAAAAAPVED---------------QAGPSQPPAEPAAEPGQAQVQQALPLKF-----------I 772
            |.:..|..|:               .:|......|.|...|..:..:...:..           |
plant   910 GTSKDAEEEEVSELSDSSESESTTQDSGTGDSELEVALLNGHGKQSKGKTILVCDSDDGAQQCDI 974

  Fly   773 RRTYVRP-----MKYPQLQNLKQTIYS-------------------------AGQFE-----KQE 802
            |.|:...     :::|...:.|.|:..                         ..|||     |.:
plant   975 RETHTAERRRLVLRFPVRNSDKLTLLENLPGSSCDVPSPTLGNGCTEDSRIPGNQFEGLDVSKVK 1039

  Fly   803 YKREMRRRPIMINTASAASSQQPGS--------VGRPRNTRGNG--------------------- 838
            :.....|....|...:.:|.:..||        |....|.||||                     
plant  1040 WGMVKARTTKRIRGEAISSHELMGSDPEGKENNVKEDSNHRGNGVTAPSCLELKTDIDDMAVDTD 1104

  Fly   839 ----GGARAGRRRGPQPAGGQPQPAYRTRAVRDQEPEHYDEV--------------------APP 879
                .|...|.:|.|:..|...:.|....:...|...|..::                    ||.
plant  1105 TVISNGLPNGGKRYPELDGSPSRVADDKASNSSQNVTHRHDLIDSLPPISTTLKIRSKRVSRAPD 1169

  Fly   880 PEEEEEDVSSNSSGDTSYSN-VEENLEDSSDESE----------TDSSDYSDWVA---------- 923
            ....:|..|.:...:|..|: :.:..||:..:..          |:.|..:|.|.          
plant  1170 TSLRQEGKSLSIDQETGGSDALNDGFEDAKCDLTLDCQKDGVVGTEISLRNDCVLELNPQICDAL 1234

  Fly   924 ----DTPGPNLEPP-------KRSKRKPLSRRPR--------SSDDSSDDERAGR---------- 959
                |.|..:..|.       :|..||..:...|        |....|.|..:|.          
plant  1235 SIANDVPVSHSHPKRMFDFVYRRKSRKHKNNLDRDAALTKEVSPGSCSQDHGSGSKSHEGASNGF 1299

  Fly   960 ------------------------SRGGQ-------------VTARKVGRKTVLFP-----PTDA 982
                                    |||.|             :..|....:...:|     |.:.
plant  1300 HGTELNGLEKSEGSLTHIQDKISDSRGNQNSQEELRSASGATLRLRSTRNRKSTYPFSETKPIET 1364

  Fly   983 NGEIPELYRPAEWLSEVIPRK-APYYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSHSSEPWNF- 1045
            . :..:|.....||:..|..: :.|.|||||||.|.||||.:||:...|::|       .||.. 
plant  1365 K-KPQQLIENVSWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLNFSSLREV-------APWTSI 1421

  Fly  1046 --HTLRDHELVRVIGIKYEIRPPR--LCC-LKLAIIDEEGNMTGTTFKIKYHDMPDVL---DFLV 1102
              ..::..|:.:|..::|...|..  .|| :.|.:||....:....||:   .:|:|:   ||||
plant  1422 KGGNIKAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEVFNKAFKL---TLPEVVTFPDFLV 1483

  Fly  1103 LRQTFDLAVQRNWSIGDRFRCMI-------VDG-WWMGQIESRHALSADFPDSSFMCFRVRW--D 1157
            .|..::.|:||||:..|  :|.:       .|| ||.|:|.:....|.|||||.:..:.|::  |
plant  1484 ERSRYEAAIQRNWTCRD--KCKVWWRDEGEEDGSWWEGRILAVKPKSPDFPDSPWERYTVKYKSD 1546

  Fly  1158 NGEYEFMSPWDMEPID----QQRVPDEVGGAVPVLPEEIRATLYQPKSEEWHRGDRDGTCRRIIN 1218
            ..|....|||::...|    |..:.||         :..|......|.|...:..:|....|.:|
plant  1547 PAETHLHSPWELFDADTKWEQPHIDDE---------QRNRLLSALTKLETSDKRTQDSFGLRKLN 1602

  Fly  1219 GLEQVMRLSIAEHFLAPVDLNIYPDYAYLIEYPIDLTTIKSRFENHFYRRITSAQFDVRYLATNA 1283
              :.|...|.:..|  ||              |:.|..|:||.||::||.:.:.:.||..:.:||
plant  1603 --QTVGNSSYSNRF--PV--------------PLSLEVIRSRLENNYYRSVEALRHDVSVMLSNA 1649

  Fly  1284 EQ-YNRRHAIIVKHSRI 1299
            |. :.|..::..|.|.:
plant  1650 ETFFGRNKSVAAKISNL 1666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BRWD3NP_732982.1 WD40 176..496 CDD:238121 112/384 (29%)
WD40 181..544 CDD:225201 129/427 (30%)
WD40 repeat 186..223 CDD:293791 19/36 (53%)
WD40 repeat 229..265 CDD:293791 13/35 (37%)
WD40 repeat 270..311 CDD:293791 12/40 (30%)
WD40 repeat 331..364 CDD:293791 10/44 (23%)
WD40 repeat 372..413 CDD:293791 14/68 (21%)
WD40 repeat 428..464 CDD:293791 11/35 (31%)
WD40 repeat 470..495 CDD:293791 8/24 (33%)
Auxin_resp 1083..1167 CDD:284030 32/96 (33%)
Bromo_WDR9_I_like 1196..1311 CDD:99958 27/105 (26%)
Bromo_WDR9_II 1371..1489 CDD:99928
AT5G49430NP_001318768.1 WD40 237..615 CDD:238121 112/385 (29%)
WD40 repeat 248..285 CDD:293791 19/36 (53%)
WD40 repeat 291..327 CDD:293791 13/35 (37%)
WD40 repeat 332..374 CDD:293791 15/47 (32%)
WD40 repeat 397..431 CDD:293791 9/33 (27%)
WD40 repeat 450..521 CDD:293791 14/70 (20%)
WD40 repeat 547..586 CDD:293791 13/38 (34%)
WD40 578..>660 CDD:392136 30/86 (35%)
WD40 repeat 590..614 CDD:293791 8/23 (35%)
Bromo_WDR9_I_like 1548..1677 CDD:99958 36/146 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1390
eggNOG 1 0.900 - - E2759_KOG0644
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 360 1.000 Inparanoid score I586
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001192
OrthoInspector 1 1.000 - - otm3182
orthoMCL 1 0.900 - - OOG6_101711
Panther 1 1.100 - - O PTHR16266
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X735
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.860

Return to query results.
Submit another query.