Sequence 1: | NP_001247284.1 | Gene: | crb / 42896 | FlyBaseID: | FBgn0259685 | Length: | 2253 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_620711.3 | Gene: | DNER / 92737 | HGNCID: | 24456 | Length: | 737 | Species: | Homo sapiens |
Alignment Length: | 887 | Identity: | 238/887 - (26%) |
---|---|---|---|
Similarity: | 332/887 - (37%) | Gaps: | 295/887 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 215 ILILGNSFSGCLLDGPGLQFVNNSTVQNVVFGHCPLT-PGPCSDHDLFTRLPDNFCLNDPCMGHG 278
Fly 279 TCSSSPE------------GYECRCTARYSGKNCQKDNGSPCAKNPCENG--GSCLENSRGDYQC 329
Fly 330 FCDPNHSGQHCE-----------TEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGAR- 382
Fly 383 CEVDTDECASQP---CQN---NGSCIDRINGFSCDCSGTGYTGAFCQTNVD-ECDKNPCLNGGRC 440
Fly 441 FDTYGWYTCQCLDGWGGEICDRPMTCQTQQCLNGGTCLDKP--------IGF------------- 484
Fly 485 ------QCLCPPEYTGELCQIAPSCAQQCPIDSECVG-GKCVCKPGSSGPIGHCLPTTTTPTPEQ 542
Fly 543 EPTTTPRTTPNPNPAIPNTLTTTTKIPPITTSRTLVGTTTGSRRPPQQPLQSPTQRSASLNACPQ 607
Fly 608 ENCLNGGTCLGYS-----GNYSCICASGYTGYNCQTSTGDGASALALTPINCNATNGKCLNGGTC 667
Fly 668 --SMNGTHCYCAVGYSGDRCEKAENCSPLNCQEPMVCVQNQCLCPENKVCNQCATQPCQNGGEC- 729
Fly 730 VDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKICGNGICKNEKGSYKCYCTPGFTGVHCDSDVD 794
Fly 795 ECLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIPG 859
Fly 860 MTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCELNID-------ECLSNPCT 917
Fly 918 N------GAKC----------------LDRVKDYFCDCHNGYKGKN--CEQDINECESNPCQYNG 958
Fly 959 NCL---------ERSNITLYQMSRITDLPKVFSQPFSFENAS 991 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
crb | NP_001247284.1 | LamG | 91..228 | CDD:238058 | 3/12 (25%) |
EGF_CA | 386..423 | CDD:238011 | 8/42 (19%) | ||
EGF_CA | 425..460 | CDD:238011 | 7/35 (20%) | ||
EGF | 466..495 | CDD:278437 | 8/55 (15%) | ||
EGF | 605..633 | CDD:278437 | 9/32 (28%) | ||
EGF_CA | 716..750 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 753..789 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 792..828 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 830..865 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 868..905 | CDD:238011 | 16/36 (44%) | ||
EGF_CA | 907..943 | CDD:238011 | 9/66 (14%) | ||
EGF_CA | 1009..1045 | CDD:238011 | |||
EGF_CA | 1047..1082 | CDD:238011 | |||
Laminin_G_1 | 1155..1290 | CDD:278483 | |||
EGF | 1316..1346 | CDD:278437 | |||
Laminin_G_1 | 1388..1550 | CDD:278483 | |||
EGF_CA | <1593..1622 | CDD:238011 | |||
Laminin_G_2 | 1692..1828 | CDD:280389 | |||
EGF_CA | 1901..1937 | CDD:238011 | |||
EGF_CA | 1939..1974 | CDD:238011 | |||
EGF_CA | 2057..2094 | CDD:238011 | |||
EGF_CA | 2096..2133 | CDD:238011 | |||
EGF_CA | 2137..2175 | CDD:238011 | |||
DNER | NP_620711.3 | Interaction with NOTCH1. /evidence=ECO:0000250 | 44..133 | 34/103 (33%) | |
EGF_CA | 393..428 | CDD:238011 | 14/43 (33%) | ||
EGF_CA | 431..465 | CDD:238011 | 16/59 (27%) | ||
EGF_CA | 469..503 | CDD:238011 | 15/35 (43%) | ||
EGF_CA | 507..541 | CDD:238011 | 19/33 (58%) | ||
EGF_CA | 581..617 | CDD:238011 | 16/36 (44%) | ||
Interaction with AP1G1 and somatodendritic targeting. /evidence=ECO:0000250 | 677..680 | 0/2 (0%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I12027 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR24044 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |