DRSC/TRiP Functional Genomics Resources

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Protein Alignment crb and Fbn1

DIOPT Version :9

Sequence 1:NP_001247284.1 Gene:crb / 42896 FlyBaseID:FBgn0259685 Length:2253 Species:Drosophila melanogaster
Sequence 2:NP_114013.2 Gene:Fbn1 / 83727 RGDID:620908 Length:2872 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crbNP_001247284.1 LamG 91..228 CDD:238058
EGF_CA 386..423 CDD:238011
EGF_CA 425..460 CDD:238011
EGF 466..495 CDD:278437
EGF 605..633 CDD:278437
EGF_CA 716..750 CDD:238011
EGF_CA 753..789 CDD:238011
EGF_CA 792..828 CDD:238011
EGF_CA 830..865 CDD:238011
EGF_CA 868..905 CDD:238011
EGF_CA 907..943 CDD:238011
EGF_CA 1009..1045 CDD:238011
EGF_CA 1047..1082 CDD:238011
Laminin_G_1 1155..1290 CDD:278483
EGF 1316..1346 CDD:278437
Laminin_G_1 1388..1550 CDD:278483
EGF_CA <1593..1622 CDD:238011
Laminin_G_2 1692..1828 CDD:280389
EGF_CA 1901..1937 CDD:238011
EGF_CA 1939..1974 CDD:238011
EGF_CA 2057..2094 CDD:238011
EGF_CA 2096..2133 CDD:238011
EGF_CA 2137..2175 CDD:238011
Fbn1NP_114013.2 Fibrillin_U_N 48..82 CDD:408021
TB 195..>228 CDD:395554
EGF_CA 246..>276 CDD:214542
EGF_CA 288..329 CDD:214542
TB 345..389 CDD:395554
EGF_CA 491..522 CDD:214542
EGF_CA 531..572 CDD:214542
EGF_CA 573..613 CDD:214542
EGF_CA 614..647 CDD:214542
TB 671..712 CDD:395554
EGF_CA 724..764 CDD:419698
EGF_CA 766..>797 CDD:214542
cEGF 788..811 CDD:403760
TB 863..>891 CDD:395554
TB 968..1010 CDD:395554
EGF_CA 1071..1105 CDD:214542
EGF_CA 1114..1150 CDD:214542
FXa_inhibition 1202..1237 CDD:405372
EGF_3 1327..1362 CDD:403986
EGF_3 1368..1403 CDD:403986
EGF_CA 1447..1487 CDD:214542
EGF_CA 1488..1519 CDD:214542
TB 1550..1591 CDD:395554
EGF_CA 1607..1639 CDD:214542
EGF_CA 1649..1688 CDD:214542
TB 1707..1750 CDD:395554
EGF_CA 1767..>1798 CDD:214542
EGF_CA 1809..1841 CDD:214542
vWFA <1848..1887 CDD:412136
EGF_CA 1931..1972 CDD:311536
EGF_CA 1974..2009 CDD:238011
EGF_CA 2014..2054 CDD:419698
TB 2071..2113 CDD:395554
EGF_CA 2128..2166 CDD:214542
EGF_CA 2167..2206 CDD:214542
TB 2357..2392 CDD:395554
vWFA <2443..2483 CDD:412136
cEGF 2466..2489 CDD:403760
EGF_CA 2486..>2517 CDD:419698
EGF_CA 2525..2567 CDD:214542
EGF_CA 2568..>2597 CDD:214542
EGF_CA 2608..2639 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11178
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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